Table 2 Cross-phenotype gene and gene-set sharing
PhenotypeAMALZANASDBMIBPDBLBWCOCHDCDMDDSMOFGHDLHHIHCLDLRASCZT2DTGUCEDU
AMNA00000000000000000000000
ALZ0NA0000000000000000000000
AN00NA000000000000000000000
ASD000NA00000000000000000000
BMI15100NA0000000000200000000
BPD00000NA000000000000000000
BL000000NA00000000100000000
BW1000000NA0000000000000010
CO30004000NA000000000000000
CHD001010000NA00000000000000
CD5000300000NA0000000200250
MDD00000000000NA000100100100
SMO000000000000NA00000000000
FG0000300100200NA0000000000
HDL02006000013003NA002000200
HH2950028221132200622NA00100300
IHC0000000000000000NA0000000
LDL0310500004400311200NA000200
RA000000000010000400NA01120
SCZ1000300000000005000NA0000
T2D11002001111002250200NA000
TG020040000020021614010002NA20
UC800000000118001524020010NA0
EDU10001000002000000000001NA
  • Upper triangular matrix: counts of gene-sets shared for each two phenotypes; lower triangular matrix: counts of genes shared for each two phenotypes after two-step approach. Cells with significant counts after FDR correction (0.05) are in boldface.