Table 1 Distributions of gQTLs and class I g×eQTLs across various genomic regions
Genomic RegionsAll SNPsaAll gQTLsbClass I g×eQTLsc
FrequencyFrequencyP-valuedFrequencyP-Valuee
Intronic0.0080.0040.28040.0082.2 × 10−7
Intergenic0.3310.3440.25480.3241.0 × 10−5
Coding0.6560.6430.29270.6652.3 × 10−6
 Synonymous0.5580.5000.02340.5359.6 × 10−9
 Nonsynonymous0.4250.4780.02650.4472.5 × 10−7
 Nonsense0.0180.0230.18590.0190.0265
  • a Total number of SNPs is 28,220.

  • b Total number of gQTLs is 482.

  • c Total number of class I g×eQTLs is 9952.

  • d Comparison with all SNPs using a binomial test.

  • e Comparison with all gQTLs using a binomial test.