Table 2 Summary of the estimation procedures evaluated in this article
partial.lmEach haplotype (additive) effect estimated by single predictor regressionYes
ridge.addRidge regression modeling additive effectsYes
ridge.domRidge regression modeling both additive and dominance effectsYes
DF.IS.noweightApprox. Diploffect using INLA and multiple imputationNo
DF.ISDiploffect using INLA and importance samplingNo
DF.IS.kinshipDF.IS including a polygenic effectNo
DF.MCMC.pseudoApprox. Diploffect model using partial MCMC and multiple imputationNo
DF.MCMCDiploffect using MCMCNo