Table 1  Proportions of genome and of segments for the different ibd state types
ibd stateAll ibdThree ibdTwo pairsOne pairNo ibd
(a1,a2,a3,a4)(0,0,0,1)(1,0,1,0)(0,2,0,0)(2,1,0,0)(4,0,0,0)
Number14361
Percentage of genome: (each state); any δ
β = 0.010.00060.01920.00960.95194.18
β = 0.020.00450.07390.03691.81188.72
β = 0.050.06490.41130.20563.90774.23
β = 0.10.45451.36360.68186.13655.23
Segment length (units α−1 Mbp); δ = 0.1
β = 0.010.2730.3540.2680.5078.786
β = 0.020.2760.3500.2650.4904.400
β = 0.050.2840.3410.2580.4431.768
β = 0.10.2990.3260.2460.3820.889
Percentage of segments: (each state); δ = 0.1
β = 0.010.010.240.168.4148.08
β = 0.020.040.480.328.4746.22
β = 0.050.221.180.788.6141.04
β = 0.10.822.261.508.6733.59
  • Results are given under the population prior model, as a function of β (δ = 0.1).