TABLE 3

The accuracy of the predictions of total genetic value (±SE) in the TEST1 data set when the training data contained T = 200 individuals and GWBLUP or BayesB is used to estimate the marker effects

Causative SNPs
GWBLUPBayesB
DataExcludedIncludedExcludedIncluded
3 QTL0.503 ± 0.0110.508 ± 0.0110.938 ± 0.0130.973 ± 0.004
30 QTL0.491 ± 0.0160.493 ± 0.0100.806 ± 0.0230.826 ± 0.019