TABLE 2

The accuracy of the predictions of total genetic value (±SE) in the TEST1 data set when T = 200 and h2 = 0.5, T = 400 and h2 = 0.25, and T = 800 and h2 = 0.125

Causative SNPsT = 200, h2 = 0.5T = 400, h2 = 0.25T = 800, h2 = 0.125
3 QTL
Excluded0.938 ± 0.0130.909 ± 0.0160.912 ± 0.011
Included0.973 ± 0.0040.936 ± 0.0110.935 ± 0.011
30 QTL
Excluded0.806 ± 0.0230.711 ± 0.0320.733 ± 0.030
Included0.826 ± 0.0190.796 ± 0.0190.780 ± 0.019