TABLE 3

Full-likelihood estimates of the relative recombination rate (rLAMARC = c, where c is the recombination rate per site per generation and μ is the neutral mutation rate per site per generation) for Daphnia species

LocusrLAMARC95% support intervals
D. pulexaOverall0.58760.4635, 0.7355
atp-ep0.60730.1620, 1.3777
cbp-EF1.86710.7719, 2.5429
rab40.25110.0356, 0.6833
tif1.10690.4869, 1.7404
D. pulicariaaOverall0.74760.3933, 1.0892
atp-ep0.59290.1831, 1.4095
cbp-EF0.28540.0408, 0.9592
rab40.27001 × 10−9, 1.4572
tif0.95070.4631, 1.8675
D. obtusabOverall0.23830.0892, 0.5367
atp-ep8 × 10−61 × 10−11, 0.1782
cbp-EF1.26340.3737, 2.9458
tif0.16231 × 10−9, 0.8932
D. ambiguactif0.29290.0483, 0.8701
D. magnactif0.76110.1793, 2.0246
  • Ninety-five percent support intervals are shown for rLAMARC. rLAMARC could not be estimated for D. arenata or D. mendotae because all loci lacked sufficient numbers of variable sites.

  • The following loci were not included for LAMARC analyses because they did not have >10 variable sites:

  • a csf and g3pdh

  • b csf, g3pdh, and rab4

  • c g3pdh.