TABLE 4

Location of the significant DArT markers associated with yellow rust found in ESWYT set 1 (ESWYTs 1, 6, 10) and ESWYT set 2 (ESWYTs 20 and 24) using linear mixed model 1 (LMM1) and linear mixed model 2 (LMM2) in each chromosome and the reported Yr genes and QTL

Short arm (S)Long arm (L)Unknown arm
ChromosomeDArT (wPt)Yr gene and QTLDArT (wPt)Yr gene and QTLDArT (wPt)Yr gene
1A5374, 4765, 2872, 7030, 40293870, 2976, 80166853, 9592
1B8949, 3465, 5678, 5801Yr9, -10, -24, -262315Yr15, -291589Yr3a, -3b, -3c, -21
1D93807711, 3743Yr25
2A7626, 7901, 6687, 3114Yr17, -3220876207Yr1
2B0100, 4916, 1489, 9402, 7757Yr27, -31 QTLa3132, 9350, 7350, 9336, 0047, 3378, 7370, 0049Yr5, -7 QTLa0950, 4210
2DYr16 QTLb4413Yr37 QTLb4223Yr8
3A9369, 16817756, 7992, 1562, 4725
3B0995, 7142, 9310, 4209, 9510, 5390, 9170, 6047, 5105, 8886, 8238, 8845Yr30, Yrns-B1c QTLd2557, 9368
3D1336, 9401QTLad
4A7280, 2084, 3795, 7807, 8271
4B8650, 1046, 61490391QTLb5265
4D4572Yr28QTLbYr22
5A1165QTLaYr34
5B51753569, 9467a, 9116QTLb4418Yr19
5DYr40 QTLd
6A7475, 1664, 0832, 4016, 90757623, 9690, 2573, 0959, 7063, 4229, 1642, 7204Yr38
6B7662Yr35, -36 QTLb15412095Yr4a, -4b
7A6034, 8789, 48353226, 64954748, 4553
7BYr6 QTLb1149, 3833, 6372, 9925, 5343, 8921, 5547, 5280, 0194, 4300, 6320, 1085, 0504Yr391533Yr2
7D1269, 3328Yr18Yr330934, 1859, 5049
  • The locations of Yr genes as per the USDA–ARS Cereal Disease Lab (http://www.ars.usda.gov/Main/docs.htm?docid=10342) and other publications are shown. The significant DArT markers and Yr genes with unknown location are given in the last two columns. Underlined genes are not present or not known to be present in the lines included in this study.

  • a Boukhatem et al. (2002).

  • b Suenaga et al. (2003).

  • c Börner et al. (2002).

  • d Singh et al. (2000).