TABLE 2

Polymorphism in Icelandic populations of A. lyrata in six S-locus region genes and divergence from the A. thaliana orthologs

DiversityDivergence from A. thaliana
Locus nameNo. of sequencesLength of sequenceNo. of haplotypesSite typeNos. of sitesNos. of polymorphic sites (Sn)πJC DXYaKA/KS
S2426329Noncoding28730.00390.1770.191
Synonymous6610.000440.096
Nonsynonymous24220.00230.018
S4205979Noncoding23330.00230.0940.223
Synonymous7820.00490.114
Nonsynonymous22560.00320.025
B80b4066926Synonymous173630.093840.1550.163
Nonsynonymous497260.009820.0253
B1205480324Noncoding221420.064730.1650.006
Synonymous116220.066020.120
Nonsynonymous40230.001260.0008
S8446612Noncoding160000.0930
Synonymous111000.17680.084
Nonsynonymous37710.000240.0148
S124068914Noncoding177100.016470.0495
Synonymous11570.015330.13890.012
Nonsynonymous37620.002330.0017
  • a Divergence with Jukes–Cantor correction for saturation.

  • b There are no noncoding sequence data for the B80 locus, as the gene has no introns.