TABLE 1

Phylogenetic parameters of the SRY gene and adjacent noncoding genomic flanks in Felidae

Genomic regionNo. BPaNo. variable sites% variable sitesNo. PI sitesb% PI sitesMP tree lengthCIcNo. homoplasiesNo. species defining auto apomorphiesdLineage support: ME/MP/MLNo. lineages recoveredTrees
5′ genomic flank99717617.68146.02160.8819129ME < 50–100%6 of 8Supplemental Figure 3e
MP < 50–100%
ML < 50–100%
SRY70685123440.0910.9560454ME 57–100%6 of 8Figure 2A
MP 52–100%
ML 59–100%
NH3 terminus1572515.91040.0NANA317NANA
HMG box234208.5840.0NANA013NANA
COOH terminus3154012.71640.0NANA124NANA
3′ genomic flank94818819.88146.02210.905018144ME < 68–100%8 of 8Supplemental Figure 4e
MP < 64–100%
ML < 73–100%
Combined265344916.923046.05340.891447338ME 79–100%8 of 8Figure 3
MP 88–100%
ML 94–100%