TABLE 4

Summary of polymorphism and divergence

Mean π (SE)Mean θ (SE)Mean K (JC) (SE)Mean θ/Ka (SE)Mean D (SE)Mean D/Dmin (SE)
X-Linked (n = 6)
India0.00265 (0.00074)0.00322 (0.00093)0.03134 (0.00535)0.16700 (0.05546)−0.631 (0.320)−0.427 (0.192)
Taiwan0.00038 (0.00020)0.00039 (0.00018)0.03111 (0.00535)0.01685 (0.00930)−0.118 (0.642)−0.172 (0.420)
Kazakhstan0.00095 (0.00028)0.00105 (0.00032)0.03358 (0.00682)0.04074 (0.01264)−0.067 (0.530)0.000 (0.474)
Czech Republic0.00025 (0.00018)0.00023 (0.00016)0.03291 (0.00687)0.01081 (0.00755)0.334 (0.000)0.316 (0.000)
Iran0.00123 (0.00039)0.00159 (0.00065)0.03247 (0.00542)0.07019 (0.03221)−0.439 (0.468)-0.249 (0.250)
France0.00010 (0.00010)0.00015 (0.00015)0.03218 (0.00562)0.00331 (0.00331)−1.055 (NA)−1.000 (NA)
Germany0.00049 (0.00024)0.00053 (0.00020)0.03299 (0.00551)0.02606 (0.00989)−0.487 (0.551)−0.473 (0.527)
Autosomal (n = 7)
India0.00821 (0.00153)0.00794 (0.00121)0.03882 (0.00142)0.21111 (0.03801)0.035 (0.308)0.026 (0.087)
Taiwan0.00608 (0.00114)0.00503 (0.00102)0.03867 (0.00136)0.13402 (0.02846)0.997 (0.401)0.246 (0.111)
Kazakhstan0.00168 (0.00069)0.00164 (0.00055)0.03869 (0.00159)0.04481 (0.01596)−0.287 (0.379)−0.275 (0.134)
Czech Republic0.00142 (0.00064)0.00157 (0.00075)0.03868 (0.00158)0.04446 (0.02231)−0.131 (0.678)−0.101 (0.236)
Iran0.00325 (0.00068)0.00345 (0.00073)0.03784 (0.00175)0.09202 (0.01904)−0.147 (0.303)−0.028 (0.109)
France0.00260 (0.00115)0.00233 (0.00068)0.03798 (0.00242)0.06558 (0.01892)−0.205 (0.609)−0.199 (0.235)
Germany0.00126 (0.00044)0.00129 (0.00056)0.03770 (0.00181)0.03535 (0.01660)0.036 (0.467)−0.052 (0.191)
  • π, the average number of pairwise differences in a sample (Nei and Li 1979); θ, Watterson's estimator (Watterson 1975); K, divergence (Jukes–Cantor corrected); D, Tajima's D-statistic (Tajima 1989); D/Dmin, ratio of Tajima's D to its theoretical minimum (Schaeffer 2002).

  • a X loci multiplied by four-thirds.