TABLE 4

Allele-specific expression

Assay IDTissueAffymetrix B/(B + M)Fraction B73 allele in mix RNAFraction B73 allele in F1 RNAMix RNA not equal to 0.50 (p = 0.1)F1 RNA not equal to 0.50 (p = 0.1)Mix not equal to F1 (p = 0.1)Statistical classificationAnnotation
AI600944Sdlg0.6690.6990.676YesYescisPutative AT-hook DNA-binding protein
AI600944Ear0.6300.6270.556YesYescisPutative AT-hook DNA-binding protein
AW447861Embryo0.3930.4360.468YescisUnknown
AY103945Embryo0.4600.4580.443YescisNucleic acid-binding protein
AY104517Embryo0.4580.4650.476YesYescisAcyl carrier protein
AY105043Embryo0.3930.3170.328YesYescisAcetolactate synthase small subunit putative
AY105204Embryo0.5780.5390.580YesYescisTransthyretin-like protein
AY105560Sdlg0.4290.3980.437YesYescisPutative 24-kDa seed maturation protein
AY105580Embryo0.6490.7270.663YesYescisPutative RNA-binding protein
AY106286Sdlg0.5830.5710.581YescisNucleolar protein
AY107073Embryo0.6020.5460.561YescisUnknown
AY107304Embryo0.6170.5780.578YesYescisRNA-binding protein
AY107304Sdlg0.5620.5970.599YesYescisRNA-binding protein
AY107489Embryo0.6240.5300.544YesYescisUnknown
AY107489Sdlg0.4050.4030.392YesYescisUnknown
AY107823Embryo0.6510.6520.683YesYescisProtein kinase
AY109016Sdlg0.5470.4840.489YesYescisProtein phosphatase 2C putative
AY111695Embryo0.3940.4140.401YescisCytosolic factor-like protein
AI600944Embryo0.5880.5510.541YesYesYescis and transPutative AT-hook DNA-binding protein
AY104377Sdlg0.4180.4470.465YesYesYescis and trans20S proteasome alpha subunit
AY104686Embryo0.4670.3410.424YesYesYescis and transRAB5A protein
AY104780Embryo0.3410.2160.350YesYesYescis and transLipid transfer protein
AY105505Sdlg0.8430.8640.798YesYesYescis and transVi polysaccharide export ATP-binding
AY105560Ear0.4020.4660.433YesYescis and transPutative 24-kDa seed maturation protein
AY105866Embryo0.3940.3150.259YesYesYescis and transZinc transporter
AY107012Embryo0.5690.5960.617YesYesYescis and transUnknown
AY107437Embryo0.5610.5140.495YesYesYescis and transPutative cytokinin inducible protein
AY107865Embryo0.2550.2530.333YesYesYescis and transDNAJ heat-shock protein
AY110779Embryo0.3450.3660.447YesYesYescis and transPutative receptor-like protein kinase
AY111813Embryo0.5930.3170.384YesYesYescis and transUnknown
AY112185Embryo0.4100.4200.390YesYesYescis and transCalcium-binding EF hand family protein
AY107012Sdlg0.4310.4960.497Not DEUnknown
AY107073Sdlg0.5990.4810.506Not DEUnknown
AY107437Sdlg0.4070.4470.475Not DEPutative cytokinin inducible protein
AY106808Embryo0.3970.4460.522YesYestransPE-PGRS family protein
  • Sdlg, seedling.