TABLE 1

Nucleotide variation at the Waxy gene

GroupSample size (n)Nucleotide diversity (π)aHaplotype diversityTajima's D
O. sativa730.00560.845+0.4991
variety indica210.00590.952+0.3726
variety tropical japonica180.00020.739−1.5037
variety temperate japonica220.001090.476−2.6149
variety aus60.00280.733+2.0874
variety aromatic60.00370.800−1.5374
O. rufipogon90.02130.972+1.1864
  • a Based on silent sites.