TABLE 2

Accuracy of estimates of the recombination rate (measured by root mean square relative error) based on the composite likelihood calculated by maxhap, but using only likelihoods from pairs of sites within a fixed distance from each other

All50 kb20 kb10 kb5 kb
RMSE0.2210.2110.2040.1900.210
  • Results are based on simulate 100-kb data sets.