TABLE 3

Polymorphism summaries of autosomal genes

GeneSpeciesaLbKcSdSexpesfπg (SD)θWh (SD)θHiDTjDFLkFFLl
ACLYIC417712.510.0003 (0.0002)0.0007 (0.0007)0.0000−1.16−1.56−1.69
SP417621.920.0005 (0.0003)0.0014 (0.0010)0.0000−1.51−2.13−2.29
ACTBIC9231334.610.0010 (0.0002)0.0009 (0.0006)0−0.09−0.15−0.16
SP9231283.820.0020 (0.0003)0.0025 (0.0009)0−0.670.20−0.07
ALAS1IC40315155.360.0104 (0.0009)0.0108 (0.0046)0.0150−0.14−0.64−0.58
SP4031775.420.0045 (0.0006)0.0051 (0.0025)0.0025−0.390.02−0.11
CEPUIC582581.840.0022 (0.0004)0.0040 (0.0019)0.0002−1.56−0.42−0.90
SP582571.620.0035 (0.0005)0.0035 (0.0017)0.00220.010.710.60
CHCIC355471.450.0036 (0.0010)0.0057 (0.0028)0.0073−1.250.02−0.41
SP355561.630.0038 (0.0007)0.0049 (0.0025)0.0164*−0.760.570.22
CKBIC465571.820.0039 (0.0007)0.0044 (0.0022)0.0049−0.350.710.48
SP465541.610.0036 (0.0003)0.0025 (0.0015)0.00301.351.151.42
ENO1IC177210.700.0027 (0.0005)0.0016 (0.0016)0.00531.170.640.89
SP177210.610.0006 (0.0005)0.0016 (0.0016)0.0000−1.16−1.56−1.69
FASIC9011726.000.0006 (0.0002)0.0007 (0.0005)0.0001−0.330.870.65
SP9001605.100 (0)0 (0)0000
FN1IC443581.820.0054 (0.0006)0.0053 (0.0025)0.00210.080.200.20
SP443651.920.0030 (0.0007)0.0033 (0.0018)0.0013−0.290.390.23
FTHIC520782.530.0044 (0.0008)0.0045 (0.0021)0.0033−0.08−0.42−0.38
SP520842.530.0016 (0.0004)0.0022 (0.0013)0.0018−0.93−0.83−1.01
GAPDIC35706010.0054 (0.0009)0.0049 (0.0020)00.310.570.58
SP357120.320.0006 (0.0004)0.0016 (0.0012)0−1.51−0.63−1.00
GH1IC6112197.450.0027 (0.0006)0.0043 (0.0020)0.0004−1.330.930.31
SP6112096.410.0045 (0.0010)0.0043 (0.0020)0.00500.150.930.83
LAMAIC224702.500 (0)0 (0)0000
SP224611.910.0005 (0.0004)0.0013 (0.0013)0.0084*−1.160.640.21
LHCGRIC634862.830.0024 (0.0004)0.0028 (0.0014)0.0008−0.42−0.19−0.31
SP634872.530.0024 (0.0004)0.0032 (0.0016)0.0006−0.87−0.66−0.86
MPPIC246140.410.0055 (0.0010)0.0047 (0.0028)0.00700.470.160.29
SP246120.300.0034 (0.0005)0.0024 (0.0018)0.00811.020.871.06
ODC1IC45412104.210.0074 (0.0006)0.0064 (0.0029)0.00600.581.54*1.50
SP4541364.110.0051 (0.0005)0.0038 (0.0020)0.00451.040.570.83
RHOIC404772.510.0058 (0.0007)0.0050 (0.0025)0.00530.510.710.77
SP404772.210.0062 (0.0007)0.0050 (0.0025)0.00420.810.710.88
RPL30IC106517216.040.0054 (0.0007)0.0057 (0.0023)0.0083−0.230.920.68
SP106518135.770.0026 (0.0007)0.0036 (0.0015)0.0090*−0.98−0.53−0.81
RPL37aIC61012114.230.0057 (0.0006)0.0052 (0.0023)0.00860.300.590.61
SP6101394.130.0042 (0.0006)0.0043 (0.0020)0.0101*−0.070.350.27
RPL5IC556541.820.0016 (0.0003)0.0021 (0.0012)0.0003−0.72−0.83−0.94
SP556651.930.0020 (0.0005)0.0026 (0.0014)0.0018−0.77−0.47−0.66
RPL7aIC414441.400.0025 (0.0005)0.0028 (0.0016)0.0006−0.291.150.89
SP414421.310.0015 (0.0003)0.0014 (0.0011)0.00100.22−0.63−0.47
TGFB2IC402561.840.0028 (0.0008)0.0043 (0.0022)0.0005−1.21−0.95−1.22
SP402531.610.0023 (0.0004)0.0022 (0.0014)0.00210.12−0.15−0.09
TMIC376250.710.0040 (0.0008)0.0039 (0.0021)0.00840.190.390.39
SP376160.310.0048 (0.0006)0.0046 (0.0024)0.00640.140.570.53
TotalIC1153918115363.9520.0036 (0.0001)0.0039 (0.0014)0−0.32−0.11−0.20
SP1153818511658.8430.0027 (0.0001)0.0029 (0.0010)0−0.31−0.36−0.40
  • * P < 0.05.

  • a IC, Italian collared flycatcher; SP, Spanish pied flycatcher.

  • b Number of sites surveyed (same in both species).

  • c Divergence with outgroup.

  • d Number of segregating sites.

  • e The expected number of segregating sites based on Ne estimated from Z-linked loci.

  • f Number of singleton sites.

  • g Average pairwise sequence difference per nucleotide (Nei 1987).

  • h Expected heterozygosity per nucleotide (Watterson 1975).

  • i Fay and Wu (2000).

  • j Tajima (1989).

  • k Fu and Li (1993).

  • l Fu and Li (1993).