TABLE 1

Regions surveyed and informative SNPs observed

Region 1 (AF010283, chromosome 3)Region 2 (AF5034333, chromosome 1)Region 3 (AF366906, chromosome 1)
SubregionFirstaLastaNo. of SNPSbFirstLastNo. of SNPSFirstLastNo. of SNPS
A2658328994519845416372052733694
B57976183106977269988310895310966912
C114211202897373173952210977611069114
D16897173885794967958431225571236055
E299233097141872098720911342221352523
F40631410684
No. of pairwise comparisons:3003No. of pairwise comparisons:66No. of pairwise comparisons:703
Total distance:38,410Total distance:42,011Total distance:63,200
Region 4 (AY144442, chromosome 8)Region 5 (AF466200, chromosome 4)Region 6 (AF527809, chromosome 5)
SubregionFirstLastNo. of SNPSFirstLastNo. of SNPSFirstLastNo. of SNPS
A7087771517425293255533689871652c
B1384841393148c57940584632315766160502
C163703164258860864614762839653403502
D1661901661901c674896781810467114737126
E173198173577872761732306
No. of pairwise comparisons:406No. of pairwise comparisons:2415No. of pairwise comparisons:496
Total distance:102,700Total distance:47,937Total distance:40,473
  • a Nucleotide positions (in GenBank sequence) of the first and last SNPs scored in each sequenced segment.

  • b The number of SNPs whose minor allele was present three or more times.

  • c Not all bases were called in this region (see materials and methods).