TABLE 3

The estimated posterior probability of Embedded Image for the six marker orders with the largest exact log likelihoods (log L) for replicates 1 and 2 from 1-F

Replicate 1Replicate 2
Marker orderlog LPosterior probMarker orderlog LPosterior prob
1 2 3 4 5 6 7 8−1903.190.9671 2 3 4 5 6 7 8−1888.350.284
2 1 3 4 5 6 7 8−1905.520.0181 2 3 4 5 7 6 8−1888.350.264
3 1 2 4 5 6 7 8−1906.670.0151 3 2 4 5 7 6 8−1888.470.217
1 2 3 5 4 6 7 8−1907.42NS1 3 2 4 5 7 6 8−1888.470.235
1 2 3 4 5 6 8 7−1908.17NS1 2 3 4 6 5 7 8−1892.91NS
3 2 1 4 5 6 7 8−1909.600.0011 3 2 4 6 5 7 8−1893.10NS
  • NS, a marker order not sampled by the MCMC procedure.