TABLE 2

Nucleotide and indel diversity in intergenic regions and introns of D. melanogaster

Nucleotide dataIndel data
Nonrepetitive indelsAll indels
π (SE)Divergence
 (SE)Tajima's D
 (SE)π (SE)DivergenceaTajima's D
 (deletions)aTajima's D
 (insertions)aπ (SE)Divergencea
Intergenic regions0.010 (0.001)0.052 (0.005)−0.744 (0.110)0.0009 (0.0001)0.0062−0.822−0.2970.0026 (0.0004)0.0129
Introns0.012 (0.001)0.064 (0.004)−0.526 (0.065)0.0011 (0.0002)0.0082−0.527−0.3590.0027 (0.0003)0.0132
  • a Fragments were lumped before analysis.

  • Unless indicated, the average (SE) across loci is given.