TABLE 2

The overlap in loci that respond as exponential phase populations of D. radiodurans R1 recover from ionizing radiation and desiccation

Accurate mass tagIdentifierGene name/annotation
DNA metabolism
DR0596ruvB/Holliday junction DNA helicase
+DR2340recA/recombinase
+DR1771uvrA/exinuclease ABC, subunit A
+DR2275uvrB/exinuclease ABC, subunit B
+DR1913gyrA/DNA gyrase, subunit A
+DR0906gyrB/DNA gyrase, subunit B
Adaptation to oxidative stress
+DR2220terB/tellurium resistance protein
DR2224terZ/tellurium resistance protein
Putative regulatory proteins
+DR2338cinA/competence-inducible protein
RNA metabolism
DR2339ligT/2′-5′ RNA ligase, putative
DR1262rsr/ribonucleotide Ro/SS-A-related protein
Protein fate
DR1114Heat-shock protein, HSP20 family
Transport
+DR1709NRAMP protein
Unknown function
DR0003ddrC/hypothetical
+DR0070ddrB/hypothetical
+DR0194ddrE/conserved hypothetical
+DR0219ddrF/hypothetical
+DR0227ddrG/hypothetical
+DR0326ddrD/hypothetical
+DR0423ddrA/hypothetical
DR0438ddrH/hypothetical
DR0659frnE/predicted dithiol-disulfide isomerase
DR0997ddrI/predicted cyclic nucleotide-binding domain/CRP family
+DR1263ddrJ/conserved hypothetical
DR1264ddrK/hypothetical
+DR1439ddrL/hypothetical
DR1440ddrM/hypothetical
DR2441ddrN/hypothetical
DR2574ddrO/predicted helix-turn-helix XRE-family
+DRA0346pprA/DNA damage repair protein
+DRB0100ddrP/hypothetical
DRB0141hicB/uncharacterized