TABLE 4

Details of the 13 viral data sets

VirusanNNbNCReference
Hog cholera virus polyprotein818242Vilcek and Belak (1997)
Dengue virus type 194633392Direct GenBank search
Ebola glycoprotein5(3′) 245688Sanchez et al. (1996)
Foot-and-mouth disease51102332Direct GenBank search
Hepatitis A67342227Fujiwara et al. (2001)
Hepatitis C9(3′) 3443043Salemi and Vandamme (2002)
Japanese encephalitis virus20(3′) 586195Direct GenBank search
Mammalian orthoreovirus7 121289Breun et al. (2001)
Newcastle disease virus nucleocapsid protein9 65489Seal et al. (2002)
Poliovirus107432209Direct GenBank search
Rabies virus glycoprotein35497524Badrane and Tordo (2001)
TT virus ORF 28171232Luo et al. (2002)
West Nile virus12 953434Direct GenBank search
  • a Complete genome of the virus unless specified otherwise.

  • b 5′ noncoding region unless specified otherwise.