TABLE 2

Percentage of significant results to test linkage vs. pleiotropy using the Knott and Haley procedure (KH method) and percentage of replicates in which linkage was the most probable model with the Bayes factor (BF method) with a low-density map

Trait ITrait IIPopulation
size
KH
cM% QTLcM% QTL% linkage
(1%)
% linkage
(5%)
BF: linkage
I3053054002613
305305800155
30153015400062
30153015800040
II27.5532.554000414
27.5532.5580041112
27.51532.515400299
27.51532.51580082222
III20540540063151
205405800386868
20154015400405966
20154015800839693
IV105505400446892
1055058009599100
101550154009599100
10155015800100100100