TABLE 5

Real data analysis: 95% high posterior density regions of QTL locations, posterior modes of QTL locations, main and epistatic effects, and heritability explained by each effect

Chromosome:1134567
QTL:1234567
95% HPD region:~6–35~84–107~125–163~114–136~167–187~10–44~175–199
Mode of location:219814212617730191
Main effect:a1 = –0.445 (0.129, 0.871)a2 = –0.613 (0.138, 0.901)a3 = –0.612 (0.140, 0.899)a4 = 0.664 (0.128, 0.912)a5 = 0.608 (0.132, 0.887)a6 = –0.499 (0.135, 0.886)a7 = 0.513 (0.128, 0.890)
Heritability of main effect:h1 = 0.053 (0.028)h2 = 0.099 (0.042)h3 = 0.098 (0.043)h4 = 0.113 (0.042)h5 = 0.097 (0.039)h6 = 0.067 (0.035)h7 = 0.070 (0.033)
Epistatic effect:b12 = –0.044 (0.155, 0.129)b13 = 0.026 (0.153, 0.113)b14 = –0.593 (0.260, 0.845)b15 = –0.009 (0.125, 0.103)b16 = –0.040 (0.149, 0.116)b17 = 0.054 (0.158, 0.101)b23 = –0.016 (0.144, 0.063)
b24 = –0.028 (0.149, 0.104)b25 = 0.001 (0.133, 0.028)b26 = –0.025 (0.138, 0.128)b27 = –0.082 (0.189, 0.142)b34 = 0.141 (0.228, 0.273)b35 = 0.346 (0.263, 0.529)b36 = –0.258 (0.256, 0.274)
b37 = 0.008 (0.142, 0.095)b45 = 0.315 (0.260, 0.512)b46 = –0.361 (0.279, 0.526)b47 = –0.048 (0.149, 0.106)b56 = –0.047 (0.152, 0.144)b57 = 0.085 (0.188, 0.156)b67 = –0.024 (0.168, 0.084)
Epistatic heritability:h12 = 0.001 (0.005)h13 = 0.002 (0.005)h14 = 0.025 (0.020)h15 = 0.001 (0.003)h16 = 0.002 (0.004)h17 = 0.002 (0.005)h23 = 0.001 (0.004)
h24 = 0.001 (0.004)h25 = 0.001 (0.003)h26 = 0.001 (0.002)h27 = 0.003 (0.006)h34 = 0.004 (0.009)h35 = 0.010 (0.009)h36 = 0.006 (0.011)
h37 = 0.001 (0.001)h45 = 0.009 (0.008)h46 = 0.011 (0.010)h47 = 0.002 (0.004)h56 = 0.002 (0.005)h57 = 0.003 (0.006)h67 = 0.001 (0.004)

Posterior standard deviations of the estimates (the first value) and the posterior probability that each effect is included in the model (the second value) are given in parentheses.