TABLE 4

Analysis of seven-QTL model: 95% high posterior density regions of QTL locations, posterior modes of QTL locations, main and epistatic effects, and heritability explained by each effect

Chromosome:1122334
QTL:1234567
95% HPD region:~16–29~40–49~12–30~44–58~13–26~42–59~2–16
Mode of location:24451654215412
Main effect:a1 = –0.714 (0.172, 0.952)a2 = 0.965 (0.171, 0.967)a3 = 0.013 (0.070, 0.091)a4 = 0.046 (0.099, 0.101)a5 = –0.107 (0.146, 0.146)a6 = –0.892 (0.153, 0.958)a7 = –0.960 (0.126, 0.966)
Heritability of main effect:h1 = 0.066 (0.030)h2 = 0.117 (0.041)h3 = 0.001 (0.002)h4 = 0.001 (0.003)h5 = 0.004 (0.007)h6 = 0.099 (0.032)h7 = 0.113 (0.029)
Epistatic effect:b12 = 1.491 (0.317, 0.933)b13 = –0.047 (0.179, 0.111)b14 = –0.077 (0.199, 0.136)b15 = 0.053 (0.177, 0.102)b16 = 0.003 (0.159, 0.067)b17 = 0.032 (0.164, 0.193)b23 = –0.083 (0.201, 0.239)
b24 = 0.083 (0.206, 0.136)b25 = 0.028 (0.157, 0.176)b26 = 0.011 (0.155, 0.062)b27 = –0.079 (0.191, 0.125)b34 = 1.58 (0.282, 0.937)b35 = –0.015 (0.149, 0.165)b36 = 0.002 (0.164, 0.083)
b37 = 0.022 (0.153, 0.175)b45 = –0.007 (0.157, 0.066)b46 = 0.211 (0.279, 0.400)b47 = 0.165 (0.246, 0.348)b56 = –1.707 (0.286, 0.930)b57 = 0.157 (0.242, 0.339)b67 = 0.046 (0.168, 0.101)
Epistatic heritability:h12 = 0.046 (0.003)h13 = 0.001 (0.002)h14 = 0.001 (0.003)h15 = 0.001 (0.001)h16 = 0.000 (0.001)h17 = 0.001 (0.002)h23 = 0.001 (0.004)
h24 = 0.002 (0.004)h25 = 0.001 (0.002)h26 = 0.001 (0.002)h27 = 0.001 (0.003)h34 = 0.059 (0.018)h35 = 0.001 (0.002)h36 = 0.001 (0.002)
h37 = 0.001 (0.002)h45 = 0.001 (0.002)h46 = 0.004 (0.006)h47 = 0.005 (0.005)h56 = 0.065 (0.021)h57 = 0.003 (0.005)h67 = 0.001 (0.003)

Posterior standard deviations of the estimates (the first value) and the posterior probability that each effect is included in the model (the second value) are given in parentheses.