TABLE 3

The variance, Var(Rn), of Rn

ν + ρ = 8ν + ρ = 32:
m = 1, Homom = 4, Homom = 1, Hetm = 1, Homo
λ/m σ 20:84:40:84:40:84:40:3216:16
10218.7116.3101.368.99205.6130.7908.3628.3
10–4766.5254.4358.3139.11461506.794553086
5 × 10–3746.7248.3363.8135.71399388.1100702883
40136.093.1565.3165.14153.3106.8868.4635.5
10–4249.6119.0121.590.49475.4177.630881094
5 × 10–3239.2117.1126.285.60432.5172.931291043
16098.7575.4758.7564.94100.379.53624.7459.1
10–4117.988.7483.7778.44169.399.281189596.4
5 × 10–3121.181.3980.3474.77162.593.631101579.0

Sample size is n = 20. Above each column is shown the values of ν and ρ as ν:ρ; Homo, rate homogeneity; Het, rate heterogeneity (ζ = 1). A total of 1000 replicates were obtained for each entry. The variances for 8:0 and 32:0 (pure homogeneous recombination) are 73.94 and 420.6, respectively, obtained from simulation of 1000 replicates.