TABLE 2

CR elements used in phylogenic analysis

ElementTypeGenBank accessionSpeciesReference
CRR AP003054AutonomousAP003054Rice
CRR AP003562AutonomousAP003562Rice
CRR AC022352AutonomousAC022352Rice
CRR AC079634AutonomousAC079634Rice
CRR AC090441AutonomousAC090441Rice
CRR AC092749AutonomousAC092749Rice
CRR9.2kbAutonomousAY101510RiceCheng et al. (2002)
RIRE7AutonomousAB033235Rice
CentA-targetaAutonomousAF078917MaizeAnaniev et al. 1998; Langdon et al. (2000)
Cereba AutonomousAF078801BarleyPresting et al. (1998)
cereba-1AutonomousAY040832BarleyHudakova et al. (2001)
cereba-2AutonomousAY040832BarleyHudakova et al. (2001)
CentANonautonomousAF078917MaizeAnaniev et al. (1998)
RCB11-1NonautonomousAB013613RiceNonomura and Kurata (1999)
CRR4.4kbNonautonomousAY101510RiceCheng et al. (2002)
  • a The CentA repeat is a nonautonomous CR element (Langdon et al. 2000). The CentA element reported by Ananiev et al. (1998) inserted into the polyprotein region of another CR element, which is named “CentA-target element” (Langdon et al. 2000).