TABLE 1

The effect of exponential population growth (rate λ) on genealogical correlations for a sample of n = 50 chromosomes (from 106 coalescent simulations)

λt2/Var(t)ρij,ijρij,ikρij,klEmbedded Image
0.010.01.000.3190.0850.0580.25
1.010.01.910.4600.1100.0670.22
5.010.03.370.5610.1070.0580.20
10.010.04.370.6040.1060.0600.19
  • The per generation recombination rate is adjusted such that the average number of recombination events in the history of the genealogy R is constant. The last column indicates the average value of r2 between mutations for which the rare allele at both loci has a frequency of at least 0.1.