TABLE 1

Parameter estimates for 10 independent analyses of the pretreatment dataset assuming constant population size and HKY model of mutation

RunMutation rate (mutations/generation/site × 105)Population size × generation length (θ)Age of root (days)Transition/transversion bias parameter (κ)
16.238 (0.0517)a1284 (13.0)796 (6.03)4.132 (0.00634)
26.173 (0.0498)1304 (12.7)799 (5.99)4.141 (0.00599)
36.218 (0.0466)1291 (12.7)794 (5.45)4.124 (0.00631)
46.168 (0.0434)1303 (14.0)797 (5.65)4.138 (0.00629)
56.297 (0.0474)1269 (12.8)784 (5.45)4.134 (0.00640)
66.159 (0.0458)1309 (12.4)802 (6.21)4.135 (0.00630)
76.308 (0.0539)1270 (13.9)784 (5.90)4.130 (0.00678)
86.256 (0.0463)1279 (11.5)790 (5.63)4.133 (0.00674)
96.247 (0.0474)1283 (13.1)791 (5.75)4.122 (0.00661)
106.201 (0.0578)1291 (15.4)801 (7.54)4.123 (0.00736)
Overall6.22712887944.131
95% HPD interval[4.20, 8.28][660, 2050][580, 1040][3.07, 5.31]
  • a Numbers in parentheses are the standard errors of the means calculated using IACT statistic.