TABLE 1

Sequence variants used to define haplotypes in the LPL locus

SiteaPositionbVariantcSiteaPositionbVariantcSiteaPositionbVariantc
1106C → A243297(A)4 → (A)5476718A → G
2110A → C253609T → C486772A → G
3145G → A263723T → C496863C → T
4325T → C273843G → A506939delAAAT
5343(TG)3 → (TG)4284016C → G517315G → C
6479T → C294343A → T527344A → G
7551(A)3 → (A)2304346C → G537360A → G
8736T → C314418C → T547413T → C
91216C → G324426T → C557754A → C
101220T → C334509T → C568088insAG
111286C → T344576A → T578089G → T
121547A → C354872G → A588285C → G
131571C → G364935T → C598292A → C
141828C → G375085G → A608393T → G
151939A → G385168T → C618533A → C
162131C → T395395(A)8 → (A)9628537A → C
172500G → A405441T → C638538(A)3 → (A)2
182619A → G415554A → C648644T → C
192987T → G425560A → G658755G → A
202996C → A435687T → C668852T → G
213022G → A446250C → T679402A → G
223248C → G456595G → C689712G → A
233290(T)7 → (T)8466678T → G699721G → A

From Nickerson et al. (1998).

  • a A site number is assigned to each variable character used to define haplotypes in order from 5′ to 3′.

  • b Position in the baseline sequence (GenBank accession no. AF050163).

  • c Substitution and insertion/deletion variants are reported as the state in the baseline sequence → alternative state.