TABLE 1

Probability of the observed Chud value or less for 24 genes in D. melanogaster

LocusCYTnLSCmapChudP
Acp26A2L49134760118.578.10.1010
Acp70A3L911473464.511.70.0101
Adh2L9248841110.595.70.3028
Amy-d2R914854152.610.00.0133
Boss3R5156514120.191.30.2422
Cec-C3R133502619.4119.80.9452
Dpp2L19173744125.19.10.0000
Est-63L9168229111.79.50.0010
E(eve)2R520831846.7100000.8697
G6pdX3217092984.817.50.0039
Hsp833L8138511109.119.60.0391
In(2L)t2L3510955564.416.20.0091
In(3L)P3L9136722107.732.60.0464
Mlc13R169032163.296.20.5396
PeriodX618742959.654.20.2970
PgdX1347721746.39.70.0200
Ref2P2L1027583829.27.60.0376
RuntX1119314262.055.50.3059
Sod(−2021)3L1511934891.956.80.1282
Tpi3R2510743759.178.70.5571
VermilionX712080111105.710.70.0000
WhiteX15599682293.818.90.0000
Yp2X611141178.91.60.0020
ZesteX6999725.816.30.1861
  • For each locus in D. melanogaster, we list the chromosomal location (CYT), the sample size (n), the length in base pairs (L), the total number of segregating sites (S), the laboratory-based estimate of the population recombination rate for the locus (Cmap), and the value of Chud for the locus. Recall that our estimates of 2Nc do not include the contribution of gene conversion to the overall rate of exchange. P is the proportion of 10,000 runs where the estimate of Chud is the observed value or less in our coalescent simulations (see methods).