Polymorphism data for human data sets
Locus | na | Bps | Sb | π (%)c | D*d | De | CHRMf | Source |
---|---|---|---|---|---|---|---|---|
Lpl | 142 | 9700 | 87 | 0.190 | 0.926 | 0.542 | 115g | Clark et al. (1998) |
Ace | 22 | 24000 | 78 | 0.098 | −0.286 | 0.391 | 17 | Rieder et al. (1999) |
Dys44 | 250 | 7622 | 34 | 0.093 | —h | 0.744 | —i | Zietkiewicz et al. (1998) |
Xq13.3 | 70 | 10163 | 33 | 0.033 | −3.346j | −1.616 | 1.8 | Kaessmann et al. (1999) |
Pdha1 | 35 | 4194 | 24 | 0.178 | 0.851 | 0.973 | 6.2 | Harris and Hey (1999) |
Duffyk | 82 | 1931 | 22 | 0.128 | 0.188 | −0.449 | —l | Hamblin and Di Rienzo (2000) |
Dmd44m | 41 | 3000 | 17 | 0.136 | −0.366 | 0.089 | 68 | Nachman and Crowell (2000) |
β-globin | 349 | 2670 | 19 | 0.157 | −0.593 | 1.058 | 21 | Harding et al. (1997) |
Dmd7l | 41 | 2389 | 12 | 0.051 | −2.631j | −1.725j | —l | Nachman and Crowell (2000) |
zfx | 336 | 1089 | 10 | 0.082 | 0.469 | −0.938 | 3.7 | Jaruzelska et al. (1999) |
Mc1r | 242 | 951 | 6 | 0.114 | −1.063 | 0.195 | 0.5 | Rana et al. (1999) |
Hprt | 10 | 2485 | 4 | 0.038 | −1.127 | −1.245 | 1.0 | Nachman et al. (1998) |
↵a Sample size.
↵b Number of segregating sites.
↵c Average number of pairwise differences per base pair, in percentage (cf. Tajima 1983).
↵d From Tajima (1989a).
↵e From Fu and Li (1993).
↵f Sequence-based estimate of the rate of recombination per locus.
↵g These values are probably underestimates since available phase information was incomplete.
↵h Could not be calculated because the data from the original ascertainment sample are unavailable.
↵i Could not be calculated because haplotype information is unavailable.
↵j P < 0.05 (two tailed). Coalescent simulations with no recombination were used to assess significance levels.
↵k Includes both Duffy and the noncontiguous 5′ region sequenced.
↵l Sequence not contiguous.
↵m This region is in the same intron as Dys44.