TABLE 5

Likelihood values and parameter estimates for Drosophila adh gene (D3)

Model codeidN/dSEstimates of parameters
M0 (one-ratio)−4779.730.094ω = 0.094
M1 (neutral)−4819.140.387p0 = 0.613
M2 (selection)−4668.550.136p0 = 0.547, p1 = 0.069 (p2 = 0.384)
ω2 = 0.175
M3 (discrete)−4662.380.114p0 = 0.513, p1 = 0.354 (p2 = 0.133),
ω0 = 0.000, ω1 = 0.116, ω2 = 0.547
M4 (freqs)−4683.070.152p0 = 0.594, p1 = 0.381, p2 = 0.000, p3 = 0.025 (p4 = 0.000)
M5 (gamma)−4663.780.113α = 0.271, β = 2.163
M6 (2gamma)−4662.850.111p0 = 0.402 (p0 = 0.598),
α0 = 5.006, β0 = 34.237, α1 = 0.024
M7 (beta)−4663.820.114p = 0.225, q = 1.685
M8 (beta&M)−4663.820.114p0 = l.000 (p1 = 0.000),
p= 0.225, q = 1.686, ω = 0.651
M9 (beta&gamma)−4663.540.114p0 = 0.295 (p1 = 0.705),
p= 0.008, q = 4.994,
α = 0.496, β = 2.806
M10 (beta&gamma + l)−4663.720.113p0 = 0.974 (p1 = 0.026),
p= 0.251, q = 2.290, α = 1.042, β = 0.690
M11 (beta&normal> 1)−4663.720.113p0 = 0.974 (p1 = 0.026),
p= 0.251, q = 2.290, μ = 1.631, α = 0.597
M12 (0&2normal>1)−4664.030.lllp0 = 0.455, p1 = 0.065,
μ2 = 0.000, σ1 = 0.470, σ2 = 0.205
M13 (3normal>0)−4662.860.lllp0 = 0.456, p1 = 0.054 (p2 = 0.500),
μ2 = 0.120,
σ0 = 0.000, σ1 = 0.266, σ2 = 0.080