TABLE 1

Estimated parameters of the Tamura-Nei model with Γ-distributed rates for HVRI sequences of human mtDNA

ParameterIdentifierMeanStandard deviation
Base frequency of AπA32.7%
Base frequency of CπC33.8%
Base frequency of GπG11.4%
Base frequency of TπT22.1%
Transition/transversionκ15.55.0
Pyrimidine/purine trans.ξ1.850.48
Rate heterogeneityα0.260.05