RT Journal Article SR Electronic T1 Genetic and Environmental Effects on Complex Traits in Mice JF Genetics JO Genetics FD Genetics Society of America SP 959 OP 984 DO 10.1534/genetics.106.060004 VO 174 IS 2 A1 Valdar, William A1 Solberg, Leah C. A1 Gauguier, Dominique A1 Cookson, William O. A1 Rawlins, J. Nicholas P. A1 Mott, Richard A1 Flint, Jonathan YR 2006 UL http://www.genetics.org/content/174/2/959.abstract AB The interaction between genotype and environment is recognized as an important source of experimental variation when complex traits are measured in the mouse, but the magnitude of that interaction has not often been measured. From a study of 2448 genetically heterogeneous mice, we report the heritability of 88 complex traits that include models of human disease (asthma, type 2 diabetes mellitus, obesity, and anxiety) as well as immunological, biochemical, and hematological phenotypes. We show that environmental and physiological covariates are involved in an unexpectedly large number of significant interactions with genetic background. The 15 covariates we examined have a significant effect on behavioral and physiological tests, although they rarely explain >10% of the variation. We found that interaction effects are more frequent and larger than the main effects: half of the interactions explained >20% of the variance and in nine cases exceeded 50%. Our results indicate that assays of gene function using mouse models should take into account interactions between gene and environment.