November 2018 Table of Contents

Investigations

• Methods, Technology, and Resources

  • Robust Genome Editing with Short Single-Stranded and Long, Partially Single-Stranded DNA Donors in Caenorhabditis elegans

    Open Access

    Gregoriy A. Dokshin, Krishna S. Ghanta, Katherine M. Piscopo, Craig C. Mello

    Genetics November 2018 210: 781-787; https://doi.org/10.1534/genetics.118.301532

• Statistical Genetics and Genomics

  • Genotyping Polyploids from Messy Sequencing Data

    David Gerard, Luis Felipe Ventorim Ferrão, Antonio Augusto Franco Garcia, Matthew Stephens

    Genetics November 2018 210: 789-807; https://doi.org/10.1534/genetics.118.301468
  • Can Deep Learning Improve Genomic Prediction of Complex Human Traits?

    Pau Bellot, Gustavo de los Campos, Miguel Pérez-Enciso

    Genetics November 2018 210: 809-819; https://doi.org/10.1534/genetics.118.301298

• Genome Integrity and Transmission

  • Selection and Plasmid Transfer Underlie Adaptive Mutation in Escherichia coli

    Sophie Maisnier-Patin, John R. Roth

    Genetics November 2018 210: 821-841; https://doi.org/10.1534/genetics.118.301347
  • Meiotic Double-Strand Break Proteins Influence Repair Pathway Utilization

    Nicolas Macaisne, Zebulin Kessler, Judith L. Yanowitz

    Genetics November 2018 210: 843-856; https://doi.org/10.1534/genetics.118.301402

• Gene Expression

  • Protection from Disulfide Stress by Inhibition of Pap1 Nuclear Export in Schizosaccharomyces pombe

    Yan Chen, Yan Zhang, Zhicheng Dong, David W. Ow

    Genetics November 2018 210: 857-868; https://doi.org/10.1534/genetics.118.301527
  • Transcription Promotes the Interaction of the FAcilitates Chromatin Transactions (FACT) Complex with Nucleosomes in Saccharomyces cerevisiae

    Benjamin J. E. Martin, Adam T. Chruscicki, LeAnn J. Howe

    Genetics November 2018 210: 869-881; https://doi.org/10.1534/genetics.118.301349
  • A Robust Methodology for Assessing Differential Homeolog Contributions to the Transcriptomes of Allopolyploids

    J. Lucas Boatwright, Lauren M. McIntyre, Alison M. Morse, Sixue Chen, Mi-Jeong Yoo, Jin Koh, Pamela S. Soltis, Douglas E. Soltis, W. Brad Barbazuk

    Genetics November 2018 210: 883-894; https://doi.org/10.1534/genetics.118.301564

• Cellular Genetics

  • Scaling of G1 Duration with Population Doubling Time by a Cyclin in Saccharomyces cerevisiae

    Heidi M. Blank, Michelle Callahan, Ioannis P. E. Pistikopoulos, Aggeliki O. Polymenis, Michael Polymenis

    Genetics November 2018 210: 895-906; https://doi.org/10.1534/genetics.118.301507

• Developmental and Behavioral Genetics

  • Multiple Histone Methyl-Lysine Readers Ensure Robust Development and Germline Immortality in Caenorhabditis elegans

    Arneet L. Saltzman, Mark W. Soo, Reta Aram, Jeannie T. Lee

    Genetics November 2018 210: 907-923; https://doi.org/10.1534/genetics.118.301518
  • Sentryn and SAD Kinase Link the Guided Transport and Capture of Dense Core Vesicles in Caenorhabditis elegans

    Open Access

    Logan M. Morrison, Stacey L. Edwards, Laura Manning, Natalia Stec, Janet E. Richmond, Kenneth G. Miller

    Genetics November 2018 210: 925-946; https://doi.org/10.1534/genetics.118.300847
  • Sentryn Acts with a Subset of Active Zone Proteins To Optimize the Localization of Synaptic Vesicles in Caenorhabditis elegans

    Open Access

    Stacey L. Edwards, Logan M. Morrison, Laura Manning, Natalia Stec, Janet E. Richmond, Kenneth G. Miller

    Genetics November 2018 210: 947-968; https://doi.org/10.1534/genetics.118.301466
  • Distinct Roles of Two Histone Methyltransferases in Transmitting H3K36me3-Based Epigenetic Memory Across Generations in Caenorhabditis elegans

    Open Access

    Jeremy Kreher, Teruaki Takasaki, Chad Cockrum, Simone Sidoli, Benjamin A. Garcia, Ole N. Jensen, Susan Strome

    Genetics November 2018 210: 969-982; https://doi.org/10.1534/genetics.118.301353
  • Caenorhabditis elegans ced-3 Caspase Is Required for Asymmetric Divisions That Generate Cells Programmed To Die

    Open Access

    Nikhil Mishra, Hai Wei, Barbara Conradt

    Genetics November 2018 210: 983-998; https://doi.org/10.1534/genetics.118.301500
  • The mTOR Target S6 Kinase Arrests Development in Caenorhabditis elegans When the Heat-Shock Transcription Factor Is Impaired

    Peter Chisnell, T. Richard Parenteau, Elizabeth Tank, Kaveh Ashrafi, Cynthia Kenyon

    Genetics November 2018 210: 999-1009; https://doi.org/10.1534/genetics.118.301533
  • Multiple Mechanisms Inactivate the LIN-41 RNA-Binding Protein To Ensure a Robust Oocyte-to-Embryo Transition in Caenorhabditis elegans

    Open Access

    Caroline A. Spike, Gabriela Huelgas-Morales, Tatsuya Tsukamoto, David Greenstein

    Genetics November 2018 210: 1011-1037; https://doi.org/10.1534/genetics.118.301421

• Population and Evolutionary Genetics

  • Birth and Death of LTR-Retrotransposons in Aegilops tauschii

    Xiongtao Dai, Hao Wang, Hongye Zhou, Le Wang, Jan Dvořák, Jeffrey L. Bennetzen, Hans-Georg Müller

    Genetics November 2018 210: 1039-1051; https://doi.org/10.1534/genetics.118.301198
  • Selection-Like Biases Emerge in Population Models with Recurrent Jackpot Events

    Oskar Hallatschek

    Genetics November 2018 210: 1053-1073; https://doi.org/10.1534/genetics.118.301516
  • Effects of Transmission Bottlenecks on the Diversity of Influenza A Virus

    Daniel Sigal, Jennifer N. S. Reid, Lindi M. Wahl

    Genetics November 2018 210: 1075-1088; https://doi.org/10.1534/genetics.118.301510
  • Estimating the Timing of Multiple Admixture Pulses During Local Ancestry Inference

    Paloma Medina, Bryan Thornlow, Rasmus Nielsen, Russell Corbett-Detig

    Genetics November 2018 210: 1089-1107; https://doi.org/10.1534/genetics.118.301411
  • Estimates of the Heritability of Human Longevity Are Substantially Inflated due to Assortative Mating

    Open Access

    J. Graham Ruby, Kevin M. Wright, Kristin A. Rand, Amir Kermany, Keith Noto, Don Curtis, Neal Varner, Daniel Garrigan, Dmitri Slinkov, Ilya Dorfman, Julie M. Granka, Jake Byrnes, Natalie Myres, Catherine Ball

    Genetics November 2018 210: 1109-1124; https://doi.org/10.1534/genetics.118.301613

• Genetics of Complex Traits

  • Selection Signatures Underlying Dramatic Male Inflorescence Transformation During Modern Hybrid Maize Breeding

    Open Access

    Joseph L. Gage, Michael R. White, Jode W. Edwards, Shawn Kaeppler, Natalia de Leon

    Genetics November 2018 210: 1125-1138; https://doi.org/10.1534/genetics.118.301487