Supporting Information for Redelings et al., 2015

Supporting Information

• Supporting Information - File S1 and Figures S1-S13 (PDF, 647 KB)
• File S1 - Supporting Information (PDF, 209 KB)
• Figure S1 - Errors for the full likelihood (posterior median), RMES, and F_IS-based methods for a large simulated sample (n = 70 individuals, L = 32 loci). (PDF, 160 KB)
• Figure S2 - Average posterior density of the uniparental proportion (s*) inferred from simulated data generated under the large sample regime (n = 70, L = 32) with a true value of s* = 0. (PDF, 118 KB)
• Figure S3 - Errors for the full likelihood (posterior median), RMES, and F_IS methods for a small sample (n = 10 individuals, L = 6 loci). (PDF, 160 KB)
• Figure S4 - Errors for the posterior mean, posterior median, and posterior mode. (PDF, 140 KB)
• Figure S5 - Frequentist coverage for Bayesian credible intervals at different levels of credibility under the large sampling regime (n = 70; L = 32). (PDF, 107 KB)
• Figure S6 - Number of generations since the most recent outcross event in the ancestry of each individual in the sample from the BP population of K. marmoratus. (PDF, 147 KB)
• Figure S7 - Number of generations since the most recent outcross event in the ancestry of each individual in the sample from the TC population of K. marmoratus. (PDF, 108 KB)
• Figure S8 - Posterior distributions for mutation rates at each locus in K. marmoratus (BP population). (PDF, 222 KB)
• Figure S9 - Mutation rates at each locus for K. marmoratus (TC population). (PDF, 204 KB)
• Figure S10 - Comparison of rank order of estimated locus-specific mutation rates between the BP and TC populations of K. marmoratus. (PDF, 105 KB)
• Figure S11 - Posterior distributions on (a) s_G, (b) p_f , (c) s˜, and (d) τ for the Schiedea salicaria data set. (PDF, 203 KB)
• Figure S12 - Estimated number of selfing generations for each individual for S. salicaria. (PDF, 106 KB)
• Figure S13 - Posterior distributions for mutation rates at locus in S. salicaria. (PDF, 145 KB)