Genetics: 185 (4)

August 2010 Table of Contents

Issue Highlights

ISSUE HIGHLIGHTS

Genetics August 2010 185: NP;

Perspectives

Mutagenesis as a Genetic Research Strategy

Raphael Falk

Genetics August 2010 185: 1135-1139; https://doi.org/10.1534/genetics.110.120469

Investigations

Methods, technology, and resources

The gypsy Insulator of Drosophila melanogaster, Together With Its Binding Protein Suppressor of Hairy-Wing, Facilitate High and Precise Expression of Transgenes in Arabidopsis thaliana

Wenjing She, Weiqiang Lin, Yubin Zhu, Yong Chen, Weiyuan Jin, Yanjun Yang, Ning Han, Hongwu Bian, Muyuan Zhu, Junhui Wang

Genetics August 2010 185: 1141-1150; https://doi.org/10.1534/genetics.110.117960

Genome integrity and transmission

Multiple Functions for Drosophila Mcm10 Suggested Through Analysis of Two Mcm10 Mutant Alleles

Jennifer Apger, Michael Reubens, Laura Henderson, Catherine A. Gouge, Nina Ilic, Helen H. Zhou, Tim W. Christensen

Genetics August 2010 185: 1151-1165; https://doi.org/10.1534/genetics.110.117234
Differential Replication of Two Chloroplast Genome Forms in Heteroplasmic Chlamydomonas reinhardtii Gametes Contributes to Alternative Inheritance Patterns

Yoshiki Nishimura, David B. Stern

Genetics August 2010 185: 1167-1181; https://doi.org/10.1534/genetics.110.118265

Gene expression

JIL-1 and Su(var)3-7 Interact Genetically and Counteract Each Other's Effect on Position-Effect Variegation in Drosophila

Huai Deng, Weili Cai, Chao Wang, Stephanie Lerach, Marion Delattre, Jack Girton, Jørgen Johansen, Kristen M. Johansen

Genetics August 2010 185: 1183-1192; https://doi.org/10.1534/genetics.110.117150
BUD22 Affects Ty1 Retrotransposition and Ribosome Biogenesis in Saccharomyces cerevisiae

Arun Dakshinamurthy, Katherine M. Nyswaner, Philip J. Farabaugh, David J. Garfinkel

Genetics August 2010 185: 1193-1205; https://doi.org/10.1534/genetics.110.119115
Comparative Transcriptome Analysis of the CO₂ Sensing Pathway Via Differential Expression of Carbonic Anhydrase in Cryptococcus neoformans

Min Su Kim, Young-Joon Ko, Shinae Maeng, Anna Floyd, Joseph Heitman, Yong-Sun Bahn

Genetics August 2010 185: 1207-1219; https://doi.org/10.1534/genetics.110.118315

Cellular genetics

The Antidepressant Sertraline Targets Intracellular Vesiculogenic Membranes in Yeast

Meredith M. Rainey, Daniel Korostyshevsky, Sean Lee, Ethan O. Perlstein

Genetics August 2010 185: 1221-1233; https://doi.org/10.1534/genetics.110.117846
Allele-Specific Suppressors of lin-1(R175Opal) Identify Functions of MOC-3 and DPH-3 in tRNA Modification Complexes in Caenorhabditis elegans

Sunhong Kim, Wade Johnson, Changchun Chen, Aileen K. Sewell, Anders S. Byström, Min Han

Genetics August 2010 185: 1235-1247; https://doi.org/10.1534/genetics.110.118406
Genetic Evidence that the Acetylation of the Smc3p Subunit of Cohesin Modulates Its ATP-Bound State to Promote Cohesion Establishment in Saccharomyces cerevisiae

Jill M. Heidinger-Pauli, Itay Onn, Douglas Koshland

Genetics August 2010 185: 1249-1256; https://doi.org/10.1534/genetics.110.116871
Deletion of a Novel F-Box Protein, MUS-10, in Neurospora crassa Leads to Altered Mitochondrial Morphology, Instability of mtDNA and Senescence

Akihiro Kato, Kiminori Kurashima, Michael Chae, Satoshi Sawada, Shin Hatakeyama, Shuuitsu Tanaka, Hirokazu Inoue

Genetics August 2010 185: 1257-1269; https://doi.org/10.1534/genetics.110.117200
Meiotic Regulators Ndt80 and Ime2 Have Different Roles in Saccharomyces and Neurospora

Elizabeth A. Hutchison, N. Louise Glass

Genetics August 2010 185: 1271-1282; https://doi.org/10.1534/genetics.110.117184

Developmental and Behavioral Genetics

Intragenic Suppression of a Trafficking-Defective Brassinosteroid Receptor Mutant in Arabidopsis

Youssef Belkhadir, Amanda Durbak, Michael Wierzba, Robert J. Schmitz, Andrea Aguirre, Rene Michel, Scott Rowe, Shozo Fujioka, Frans E. Tax

Genetics August 2010 185: 1283-1296; https://doi.org/10.1534/genetics.109.111898
The Consequences of Regulation of desat1 Expression for Pheromone Emission and Detection in Drosophila melanogaster

Benjamin Houot, François Bousquet, Jean-François Ferveur

Genetics August 2010 185: 1297-1309; https://doi.org/10.1534/genetics.110.117226
Parallel Genetic and Proteomic Screens Identify Msps as a CLASP–Abl Pathway Interactor in Drosophila

L. A. Lowery, H. Lee, C. Lu, R. Murphy, R. A. Obar, B. Zhai, M. Schedl, D. Van Vactor, Y. Zhan

Genetics August 2010 185: 1311-1325; https://doi.org/10.1534/genetics.110.115626
Paralogous Genes Involved in Juvenile Hormone Action in Drosophila melanogaster

Aaron Baumann, Joshua Barry, Shaoli Wang, Yoshihiro Fujiwara, Thomas G. Wilson

Genetics August 2010 185: 1327-1336; https://doi.org/10.1534/genetics.110.116962

Population and evolutionary genetics

Population Structure With Localized Haplotype Clusters

Sharon R. Browning, Bruce S. Weir

Genetics August 2010 185: 1337-1344; https://doi.org/10.1534/genetics.110.116681
Some Consequences of Demographic Stochasticity in Population Genetics

Todd L. Parsons, Christopher Quince, Joshua B. Plotkin

Genetics August 2010 185: 1345-1354; https://doi.org/10.1534/genetics.110.115030
Topologies of the Conditional Ancestral Trees and Full-Likelihood-Based Inference in the General Coalescent Tree Framework

Ori Sargsyan

Genetics August 2010 185: 1355-1368; https://doi.org/10.1534/genetics.109.112847
Extensive Loss of RNA Editing Sites in Rapidly Evolving Silene Mitochondrial Genomes: Selection vs. Retroprocessing as the Driving Force

Daniel B. Sloan, Alice H. MacQueen, Andrew J. Alverson, Jeffrey D. Palmer, Douglas R. Taylor

Genetics August 2010 185: 1369-1380; https://doi.org/10.1534/genetics.110.118000
Estimating the Parameters of Selection on Nonsynonymous Mutations in Drosophila pseudoobscura and D. miranda

Penelope R. Haddrill, Laurence Loewe, Brian Charlesworth

Genetics August 2010 185: 1381-1396; https://doi.org/10.1534/genetics.110.117614
A High Frequency of Beneficial Mutations Across Multiple Fitness Components in Saccharomyces cerevisiae

David W. Hall, Sarah B. Joseph

Genetics August 2010 185: 1397-1409; https://doi.org/10.1534/genetics.110.118307
Using Environmental Correlations to Identify Loci Underlying Local Adaptation

Graham Coop, David Witonsky, Anna Di Rienzo, Jonathan K. Pritchard

Genetics August 2010 185: 1411-1423; https://doi.org/10.1534/genetics.110.114819

Genetics of complex traits

A Genetic Model for the Female Sterility Barrier Between Asian and African Cultivated Rice Species

Andrea Garavito, Romain Guyot, Jaime Lozano, Frédérick Gavory, Sylvie Samain, Olivier Panaud, Joe Tohme, Alain Ghesquière, Mathias Lorieux

Genetics August 2010 185: 1425-1440; https://doi.org/10.1534/genetics.110.116772
The Use of Family Relationships and Linkage Disequilibrium to Impute Phase and Missing Genotypes in Up to Whole-Genome Sequence Density Genotypic Data

Theo Meuwissen, Mike Goddard

Genetics August 2010 185: 1441-1449; https://doi.org/10.1534/genetics.110.113936
Identification of Selection Signatures in Cattle Breeds Selected for Dairy Production

Alessandra Stella, Paolo Ajmone-Marsan, Barbara Lazzari, Paul Boettcher

Genetics August 2010 185: 1451-1461; https://doi.org/10.1534/genetics.110.116111
Graph-Based Data Selection for the Construction of Genomic Prediction Models

Steven Maenhout, Bernard De Baets, Geert Haesaert

Genetics August 2010 185: 1463-1475; https://doi.org/10.1534/genetics.110.116426
Allelic Variation in Cell Wall Candidate Genes Affecting Solid Wood Properties in Natural Populations and Land Races of Pinus radiata

S. K. Dillon, M. Nolan, W. Li, C. Bell, H. X. Wu, S. G. Southerton

Genetics August 2010 185: 1477-1487; https://doi.org/10.1534/genetics.110.116582
Directionality of Epistasis in a Murine Intercross Population

Mihaela Pavlicev, Arnaud Le Rouzic, James M. Cheverud, Günter P. Wagner, Thomas F. Hansen

Genetics August 2010 185: 1489-1505; https://doi.org/10.1534/genetics.110.118356

Genome and systems biology

Phantom, a New Subclass of Mutator DNA Transposons Found in Insect Viruses and Widely Distributed in Animals

Claudia P. Marquez, Ellen J. Pritham

Genetics August 2010 185: 1507-1517; https://doi.org/10.1534/genetics.110.116673
Evolution of a Distinct Genomic Domain in Drosophila: Comparative Analysis of the Dot Chromosome in Drosophila melanogaster and Drosophila virilis

Wilson Leung, Christopher D. Shaffer, Taylor Cordonnier, Jeannette Wong, Michelle S. Itano, Elizabeth E. Slawson Tempel, Elmer Kellmann, David Michael Desruisseau, Carolyn Cain, Robert Carrasquillo, Tien M. Chusak, Katazyna Falkowska, Kelli D. Grim, Rui Guan, Jacquelyn Honeybourne, Sana Khan, Louis Lo, Rebecca McGaha, Jevon Plunkett, Justin M. Richner, Ryan Richt, Leah Sabin, Anita Shah, Anushree Sharma, Sonal Singhal, Fine Song, Christopher Swope, Craig B. Wilen, Jeremy Buhler, Elaine R. Mardis, Sarah C. R. Elgin

Genetics August 2010 185: 1519-1534; https://doi.org/10.1534/genetics.110.116129

Letters to the Editors

The Distinction Between Recoding and Codon Reassignment

John F. Atkins, Pavel V. Baranov

Genetics August 2010 185: 1535-1536; https://doi.org/10.1534/genetics.110.119016
Genetics Computer Teaching Simulation Programs: Promise and Problems

J. A. Sved

Genetics August 2010 185: 1537-1540; https://doi.org/10.1534/genetics.110.116640
Response for Genetics

Elizabeth A. Ruedi, R. Scott Hawley

Genetics August 2010 185: 1540;

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August 2010 Table of Contents

Issue Highlights

Perspectives

Investigations

Methods, technology, and resources

Genome integrity and transmission

Gene expression

Cellular genetics

Developmental and Behavioral Genetics

Population and evolutionary genetics

Genetics of complex traits

Genome and systems biology

Letters to the Editors

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