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  • Reconstruction of Genome Ancestry Blocks in Multiparental Populations
    Chaozhi Zheng, Martin P. Boer, Fred A. van Eeuwijk
    Genetics August 2015 200: 1073-1087; https://doi.org/10.1534/genetics.115.177873
    ...reconstruction in breeding populations. The R/qtl package (Broman et al. 2003) can be applied only to backcross and intercross data and possibly homozygous RIL data. King et al. (2012) have implemented an HMM for analyzing dense semicodominant restriction site-associated DNA (RAD) markers, where the prior model ~~~
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