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  • Genome-Wide Characterization of Tetrahymena thermophila Chromosome Breakage Sites. II. Physical and Genetic Mapping
    Donna Cassidy-Hanley, Yelena Bisharyan, Vladimir Fridman, Joseph Gerber, Cindy Lin, Eduardo Orias, Judith D. Orias, Hilary Ryder, Linh Vong, Eileen P. Hamilton
    Genetics August 2005 170: 1623-1631; https://doi.org/10.1534/genetics.104.031435
    ...) genome of Tetrahymena thermophila are generated by developmental fragmentation of the five micronuclear (germline) chromosomes. This fragmentation is site specific, directed by a conserved chromosome breakage sequence (Cbs element). An accompanying article in this issue reports the development ~~~
  • Genetic Evidence for Sites of Interaction Between the Gal3 and Gal80 Proteins of the Saccharomyces cerevisiae GAL Gene Switch
    Cuong Q. Diep, Xiaorong Tao, Vepkhia Pilauri, Mandy Losiewicz, T. Eric Blank, James E. Hopper
    Genetics February 2008 178: 725-736; https://doi.org/10.1534/genetics.107.074799
    ...). All GHMP superfamily members have conserved motifs for the binding of ATP and their specific substrates, and most have been crystallized with their substrates bound. Thus, the binding sites for galactose and ATP in galactokinase are well established. All GHMP members share a similar overall protein ~~~
  • Alternative Transcription Initiation Sites and Polyadenylation Sites Are Recruited During Mu Suppression at the rf2a Locus of Maize
    Xiangqin Cui, An-Ping Hsia, Feng Liu, Daniel A. Ashlock, Roger P. Wise, Patrick S. Schnable
    Genetics February 2003 163: 685-698;
    ...a novel Mu transposon insertion (Mu10) in its 5 untranslated region (UTR). The suppressible rf2a-m9390 allele has a Mu1 insertion in its 5 UTR. During suppression, alternative transcription initiation sites flanking the Mu1 transposon yield functional transcripts. The suppressible rf2a-m8110 allele has ~~~
  • Loss-of-Function Alleles of the JIL-1 Histone H3S10 Kinase Enhance Position-Effect Variegation at Pericentric Sites in Drosophila Heterochromatin
    Xiaomin Bao, Huai Deng, Jørgen Johansen, Jack Girton, Kristen M. Johansen
    Genetics June 2007 176: 1355-1358; https://doi.org/10.1534/genetics.107.073676
    ...Accepted for publication April 12, 2007 ABSTRACT In this study we show that loss-of-function alleles of the JIL-1 histone H3S10 kinase act as enhancers of position-effect variegation at pericentric sites whereas the gain-of-function JIL-1Su(var)3-13 allele acts as a suppressor strongly supporting ~~~
  • The Distribution of Transgene Insertion Sites in Barley Determined by Physical and Genetic Mapping
    Haroldo Salvo-Garrido, Silvia Travella, Lorelei J. Bilham, Wendy A. Harwood, John W. Snape
    Genetics July 2004 167: 1371-1379; https://doi.org/10.1534/genetics.103.023747
    ...received November 6, 2003 Accepted for publication April 2, 2004 ABSTRACT The exact site of transgene insertion into a plant host genome is one feature of the genetic transformation process that cannot, at present, be controlled and is often poorly understood. The site of transgene insertion may have ~~~
  • Mapping Sites of Positive Selection and Amino Acid Diversification in the HIV Genome
    Tulio de Oliveira, Marco Salemi, Michelle Gordon, Anne-Mieke Vandamme, Estrelita Janse van Rensburg, Susan Engelbrecht, Hoosen M. Coovadia, Sharon Cassol
    Genetics July 2004 167: 1047-1058; https://doi.org/10.1534/genetics.103.018135
    ...to identify positively selected sites that are likely to be involved in the immune control of HIV-1. Analysis of subtypes B and C revealed widespread adaptive evolution. Positively selected amino acids were detected in all nine HIV-1 proteins, including Env. Of particular interest was the high level ~~~
  • Properties of Natural Double-Strand-Break Sites at a Recombination Hotspot in Saccharomyces cerevisiae
    Stuart J. Haring, George R. Halley, Alex J. Jones, Robert E. Malone
    Genetics September 2003 165: 101-114;
    ..., 2003 ABSTRACT This study addresses three questions about the properties of recombination hotspots in Saccharomyces cerevisiae : How much DNA is required for double-strand-break (DSB) site recognition? Do naturally occurring DSB sites compete with each other in meiotic recombination? What role does ~~~
  • Effects of Natural Selection on Interpopulation Divergence at Polymorphic Sites in Human Protein-Coding Loci
    Austin L. Hughes, Bernice Packer, Robert Welch, Andrew W. Bergen, Stephen J. Chanock, Meredith Yeager
    Genetics July 2005 170: 1181-1187; https://doi.org/10.1534/genetics.104.037077
    ...was evidence of purifying selection acting at these sites, which in turn causes a reduction in interpopulation divergence. By contrast, a small number of SNP sites in these categories revealed unusually high genetic distances between the two most diverged populations (African and Asian); these loci may have ~~~
  • The Enhancer-Blocking Activity of the Fab-7 Boundary From the Drosophila Bithorax Complex Requires GAGA-Factor-Binding Sites
    Susan Schweinsberg, Kirsten Hagstrom, Daryl Gohl, Paul Schedl, Ram P. Kumar, Rakesh Mishra, Francois Karch
    Genetics November 2004 168: 1371-1384; https://doi.org/10.1534/genetics.104.029561
    ...bithorax complex (BX-C). One of the three nuclease hypersensitive sites in the Fab-7 boundary, HS1, contains multiple consensus-binding sequences for the GAGA factor, a protein known to be involved in the formation and/or maintenance of nucleosome-free regions of chromatin. GAGA protein has been shown ~~~
  • Accuracy and Power of Statistical Methods for Detecting Adaptive Evolution in Protein Coding Sequences and for Identifying Positively Selected Sites
    Wendy S. W. Wong, Ziheng Yang, Nick Goldman, Rasmus Nielsen
    Genetics October 2004 168: 1041-1051; https://doi.org/10.1534/genetics.104.031153
    ...for detecting positive selection or identifying positively selected sites. MUCH attention has recently been devoted to the mony reconstruction of ancestral sequences, and an ex-detection of positive selection on protein-coding cess of nonsynonymous substitutions is tested indepenDNA sequences in molecular ~~~

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The Genetics Society of America (GSA), founded in 1931, is the professional membership organization for scientific researchers and educators in the field of genetics. Our members work to advance knowledge in the basic mechanisms of inheritance, from the molecular to the population level.

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