TABLE 2

Information regarding number and density of SNP and significance tests for each Chromosome (BTA)

bp/SNPCCLL for P < 0.01a
BTALength (Mbp)SNP (N)MeanMaximum1 breed5 breeds
1161173093,064978,843129.2372.24
2141156290,269783,395137.9884.34
3128140990,845863,367135.7581.79
4124134192,468830,579111.7288.82
5126133894,170954,295110.8281.94
6123251748,8681,107,425178.66115.85
7112116596,137986,266106.6176.48
8117128690,980831,673100.9275.76
91081074100,559870,580108.8970.09
10106120388,1131,124,898110.7483.84
11110130584,291655,880104.6278.63
128593291,202999,234109.3496.61
1384103081,553903,334122.4681.06
1481280628,867664,832178.29123.76
158589295,291988,771105.1382.24
167890686,093888,460118.2283.86
177789186,420783,29497.1571.80
186671792,0501,014,891130.4278.83
196574886,898805,252110.2179.19
207689584,9161,411,900104.4271.93
216971696,369909,40388.4465.56
226273684,2391,126,708133.8183.94
235365181,413629,83494.3368.35
246577284,197657,65593.8378.44
2544128034,375887,633161.46102.13
265261984,0061,069,53689.4466.36
274953192,279953,38079.0063.18
284655283,333593,12487.1471.15
295254495,5881,533,744106.0781.58
X89541164,5102,170,289138.19118.71
  • For each chromosome (BTA), the length in base pairs (Mbp), the number of evaluated genotypes (SNP), SNP density statistics, and the critical values of the negative composite log likelihood (CCLL) above which significance was declared as P < 0.01 on a genome-wide level for single- and 5-breed subpopulations.

  • a P < 0.01 on a genome-wide basis.