TABLE 3

AFLP simulation results

True:Balancing selectionNeutralDirectional selection
Classified:Bal.Neut.Direc.Bal.Neut.Direc.Bal.Neut.Direc.
Pop-20 (0)100 (100)0 (0)0 (0)794 (788)6 (12)0 (0)70 (59)30 (41)
Pop-6a37 (60)63 (40)0 (0)20 (61)758 (702)22 (37)0 (0)29 (28)71 (72)
Pop-1072 (81)28 (19)0 (0)21 (45)755 (721)24 (34)0 (0)21 (19)79 (81)
Pop-2095 (97)5 (3)0 (0)26 (50)749 (709)25 (41)0 (0)14 (10)86 (90)
Fst-0.051 (14)99 (86)0 (0)0 (19)784 (752)16 (29)0 (0)33 (22)67 (78)
Fst-0.1027 (49)73 (51)0 (0)17 (46)761 (712)22 (42)0 (0)26 (22)74 (78)
Fst-0.15a37 (60)63 (40)0 (0)20 (61)758 (702)22 (37)0 (0)29 (28)71 (72)
Fst-0.2551 (67)49 (33)0 (0)23 (47)763 (724)14 (29)0 (0)30 (29)70 (71)
Size-1515 (35)85 (65)0 (0)8 (33)776 (736)16 (31)0 (1)38 (32)62 (67)
Size-30a37 (60)63 (40)0 (0)20 (61)758 (702)22 (37)0 (0)29 (28)71 (72)
Size-5047 (65)53 (35)0 (0)38 (65)734 (684)28 (51)0 (0)21 (17)79 (83)
Size-10061 (73)39 (27)0 (0)40 (66)732 (688)28 (46)0 (0)19 (18)81 (82)
Fis-039 (59)61 (41)0 (0)23 (50)760 (722)17 (28)0 (0)29 (24)71 (76)
Fis-0.5a37 (60)63 (40)0 (0)20 (61)758 (702)22 (37)0 (0)29 (28)71 (72)
Fis-137 (57)63 (43)0 (0)25 (60)755 (703)20 (37)0 (0)25 (21)75 (79)
  • Numbers of AFLP loci simulated under (“true”) balancing selection, neutrality, and directional selection that were classified in each category using a reversible-jump cutoff of 0.79 (0.69) that give false-positive rates of 5% (10%) are shown. Bal., balancing selection; Neut., neutrality; Direc., directional selection.

  • a These data sets represent the same reference data set that is replicated in the table to make comparisons between results.