TABLE 2

Nucleotide diversity within D. miranda (values expressed as percentages)

πbθwc
GeneReplacementSynonymousSilentReplacementSynonymousSilentTajima's D:
 All sites
bcd0.020.740.870.040.950.97−0.63
Bruce0.040.120.190.070.230.30−1.53
Gld0.020.750.750.030.600.600.51
hyd0.050.000.130.100.000.23−1.79
rosy0.241.751.690.251.691.630.02
sry-alphaa0.310.300.300.360.280.28−0.45
ade30.000.090.260.000.100.29−0.45
Adha0.000.370.280.000.340.230.99
amd0.020.610.270.050.610.35−1.00
Ddc0.210.320.320.190.310.310.32
Eno0.020.430.340.040.660.52−1.43
Lam0.050.420.330.060.390.310.05
Uro0.000.580.520.000.510.52−0.06
AnnX0.040.000.000.070.000.00−1.14
Cyp1aNANA0.49NANA0.63−0.92
Gapdh20.000.000.000.000.000.00NA
scutea0.110.360.250.130.420.34−0.89
sesBa0.000.100.320.000.200.41−0.74
sisAa0.410.840.750.430.650.84−0.42
swallowa0.050.180.110.090.150.09−0.83
Average0.080.420.410.100.420.44−1.11
  • a Sequence data are from Yi et al. (2003) after realignment with McAlign (Keightley and Johnson 2004).

  • b Pairwise nucleotide diversity (Nei 1987).

  • c Nucleotide site variability is based on the number of segregating sites (Watterson 1975).

  • NA, not available.