TABLE 1

Details of the genes studied

Segment sequenced
Gene5′3′CodingbNoncodingbTotalbChromosome
bcd bicoidExon 2Exon 31068  7211402
Bruce BruceExon 19Exon 23 627 306 9332
ftz fushi tarazuExon 1Exon 21017 11111282
Gld glucose dehydrogenaseExon 3Exon 31350   013502
hb hunchbackExon 1Exon 12001   020012
hyd hyperplastic discsExon 15Exon 19 903 27011732
ninaE (rh1) neither inactivation nor
   after potential EExon 2Exon 5 936 76216982
Nop56 Nop56Exon 2Exon 31275  6313382
RpL32 (rp49) ribosomal protein L325′-FID3′-FID 402 81412162
rosy (Xdh) rosyExon 2Exon 32295  6323582
sry-alphaa serendipity αExon 1Exon 1 477   0 4772
Tl TollExon 1Exon 22175  9022652
ade3 (Gart) adenosine 3Exon 2Exon 51377 80121784
Adha alcohol dehydrogenase5′-FID3′-FID 762149622584
Adhr Adh-relatedExon 2Exon 3 678  63 7414
Amd α-methyl dopa-resistantExon 1Exon 2 912 46513774
Ddc dopa decarboxylaseExon 3Exon 3 912   0 9124
dpp decapentaplegicExon 1Exon 21002229532974
Eno EnolaseExon 2Exon 3c1050  6911194
Gpdh glycerol-3-phosphate
   dehydrogenaseExon 1Exon 3 411354439554
Lam LaminExon 1Exon 2d1500  9015904
smo smoothenedExon 3Exon 61284 22915134
Uro urate oxidaseExon 1Exon 2 864  69 9334
AnnX Annexin XExon 2Intron 3 612 264 876XL
Cyp1a cyclophylin 1Intron 1Intron 1   0 634 634XL
Gapdh2 glyceraldehyde-3-phosphate
   dehydrogenase 2Exon 1Exon 1 768   0 768XL
scutea scuteExon 13′-FID 684 4071091XL
sesBa stress-sensitive BExon 2Exon 4 711 174 885XL
sisAa sisterless A5′-FID3′-FID 63612921928XL
swallowa swallowExon 1Exon 31026 1441170XL
Est-5B esterase-5B5′-FIDExon 21569 1861755XR
Hsp83 (Hsp82) heat-shock protein 83Exon 1Exon 1 789   0 789XR
Sod superoxide dismutaseExon 1Exon 2 318 399 717XR
  • a Polymorphism data are from Yi et al. (2003).

  • b Length in base pairs (including alignment gaps).

  • c Exon 2 of D. melanogaster.

  • d Exon 3 of D. melanogaster.

  • Names in parentheses represent the names used in previous studies. FID, flanking intergenic DNA.