TABLE 2

Estimates of nucleotide diversity and divergence

PolymorphismDivergencea
LocusPopulationNSθWπTπsilπsynπnonsynπnonsynsynDTajimaDKsKaKa/Ks
Adh FRA6150.00300.00270.00450.00630.00000.0000.597
 AUT10580.00940.00800.01210.01670.00290.176−0.689
 SWE S10660.01070.00980.01320.02290.00370.162−0.398
 SWE N8490.00860.00890.01080.02330.00320.1360.202
 Total341160.01310.00900.01190.02220.00280.128−1.8160.0340.0450.0120.259
 SD0.00410.0080
CI-1 FRA10270.01210.00950.00970.01970.00920.466−1.018
 AUT10230.01070.01100.01280.01130.00850.7530.378
 SWE S12240.01000.00790.00980.02040.00540.263−0.928
 SWE N14350.01390.01050.01180.01230.00850.694−1.074
 Total46620.01840.01010.01150.01570.00820.523−1.5230.0510.0840.0200.243
 SD0.00540.0007
GAPDH FRA10370.01650.01450.02430.01980.00360.184−0.589
 AUT12310.01290.01320.01930.02460.00160.0660.070
 SWE S12350.01460.01510.02000.03200.00470.1460.148
 SWE N14330.01310.01310.01960.03390.00220.0640.003
 Total48760.01760.01470.02230.03030.00310.102−1.1280.0240.0400.0020.042
 SD0.00640.0006
GA20ox1 FRA10250.00530.00430.00620.00980.00270.270−0.887
 AUT8210.00480.00470.00740.01240.00270.220−0.110
 SWE S12340.00670.00610.01010.01200.00270.225−0.354
 SWE N12400.00790.00680.01190.01530.00370.242−0.616
 Total42810.01130.00590.00940.01300.00310.237−1.6960.0340.0560.0170.300
 SD0.00340.0004
TI-3 FRA10240.01330.01240.01680.02020.01070.532−0.308
 AUT12320.01660.01610.02420.02910.01290.442−0.144
 SWE S12290.01500.01880.02880.03460.01490.4301.121
 SWE N14250.01230.00870.01720.02060.00540.260−1.254
 Total48490.02160.01440.02290.02760.01120.406−0.5860.0550.0740.0460.623
 SD0.00530.0172
Average0.01670.01110.01600.02200.00590.2880.0400.0610.0200.296
  • a Jukes-Cantor-corrected divergence vs. P. trichocarpa.

  • Significant values are indicated in italic.