TABLE 7

Point estimates and their support regions from different analyses

QTLIMMQMFormulaFormula
Nonconstant information
32.730.0 [26.5, 35.5]29.5 [26.5, 36.0]28.25 [22, 35]32.85 [23, 38]
58.060.0 [0.0, 63.5]60.0 [20.0, 66.0]56.45 [56, 60]44.45 [40, 49] and [57, 61]
Fully informative data
32.731.5 [26.0, 36.5]31.5 [27.0, 34.5]32.95 [28, 37]32.85 [28, 37]
58.060 [0.0, 63.5]55.5–56.0 [45.0, 64.0]45.55 [41, 60]54.55 [41, 63]

True QTL locations, their estimated locations and one-lod-support intervals from the IM and MQM analyses, and Bayesian point estimates (modes of the QTL intensity) together with suggested support intervals Formula when parental genotypes and haplotypes are available, and Formula when no parental haplotypes are available (from Table 5). LOD score was evaluated every 0.5 cM in the IM and MQM estimation. The posterior modes (intervals) were obtained with binlength 0.1 cM (1.0 cM), using all 5,000,000 sampled values in Formula and 1,000,000 values in Formula. Note that in the IM and MQM analyses, there is no counterpart to estimates in column Formula.