Genome integrity and transmission Pavel Neumann, Huihuang Yan, and Jiming Jiang The Centromeric Retrotransposons of Rice Are Transcribed and Differentially Processed by RNA Interference Genetics 2007 176: 749–761. [Abstract] [Full Text] [PDF] [Data Supplement] Mehar S. Khatkar, Kyall R. Zenger, Matthew Hobbs, Rachel J. Hawken, Julie A. L. Cavanagh, Wes Barris, Alexander E. McClintock, Sara McClintock, Peter C. Thomson, Bruce Tier, Frank W. Nicholas, and Herman W. Raadsma A Primary Assembly of a Bovine Haplotype Block Map Based on a 15,036-Single-Nucleotide Polymorphism Panel Genotyped in Holstein–Friesian Cattle Genetics 2007 176: 763–772. [Abstract] [Full Text] [PDF] [Data Supplement] Neal Mitra and G. Shirleen Roeder A Novel Nonnull ZIP1 Allele Triggers Meiotic Arrest With Synapsed Chromosomes in Saccharomyces cerevisiae Genetics 2007 176: 773–787. [Abstract] [Full Text] [PDF]
Gene expression Z. W. Luo, E. Potokina, A. Druka, R. Wise, R. Waugh, and M. J. Kearsey SFP Genotyping From Affymetrix Arrays Is Robust But Largely Detects Cis-acting Expression Regulators Genetics 2007 176: 789–800. [Abstract] [Full Text] [PDF] [Data Supplement] Swarnava Roy, Matthew K. Gilbert, and Craig M. Hart Characterization of BEAF Mutations Isolated by Homologous Recombination in Drosophila Genetics 2007 176: 801–813. [Abstract] [Full Text] [PDF] Kyoji Horie, Ei-suke Saito, Vincent W. Keng, Ryuji Ikeda, Hiroshi Ishihara, and Junji Takeda Retrotransposons Influence the Mouse Transcriptome: Implication for the Divergence of Genetic Traits Genetics 2007 176: 815–827. [Abstract] [Full Text] [PDF] [Data Supplement] Stephen M. Gross and Jay B. Hollick Multiple Trans-Sensing Interactions Affect Meiotically Heritable Epigenetic States at the Maize pl1 Locus Genetics 2007 176: 829–839. [Abstract] [Full Text] [PDF]
Cellular genetics Rebecca L. Hurto, Amy Hin Yan Tong, Charles Boone, and Anita K. Hopper Inorganic Phosphate Deprivation Causes tRNA Nuclear Accumulation via Retrograde Transport in Saccharomyces cerevisiae Genetics 2007 176: 841–852. [Abstract] [Full Text] [PDF] [Data Supplement] Alexandre Berr and Ingo Schubert Interphase Chromosome Arrangement in Arabidopsis thaliana Is Similar in Differentiated and Meristematic Tissues and Shows a Transient Mirror Symmetry After Nuclear Division Genetics 2007 176: 853–863. [Abstract] [Full Text] [PDF] [Data Supplement] Trisha J. Brock, John Browse, and Jennifer L. Watts Fatty Acid Desaturation and the Regulation of Adiposity in Caenorhabditis elegans Genetics 2007 176: 865–875. [Abstract] [Full Text] [PDF] Jaspreet Kaur and Anand K. Bachhawat Yct1p, a Novel, High-Affinity, Cysteine-Specific Transporter From the Yeast Saccharomyces cerevisiae Genetics 2007 176: 877–890. [Abstract] [Full Text] [PDF]
Developmental and behavioral genetics SeYeon Chung, Sangjoon Kim, Jeongsook Yoon, Paul N. Adler, and Jeongbin Yim The Balance Between the Novel Protein Target of Wingless and the Drosophila Rho-Associated Kinase Pathway Regulates Planar Cell Polarity in the Drosophila Wing Genetics 2007 176: 891–903. [Abstract] [Full Text] [PDF] Girish Deshpande, Nilay Sethi, and Paul Schedl toutvelu, a Regulator of Heparan Sulfate Proteoglycan Biosynthesis, Controls Guidance Cues for Germ-Cell Migration Genetics 2007 176: 905–912. [Abstract] [Full Text] [PDF] Huawen Lin and Ursula W. Goodenough Gametogenesis in the Chlamydomonas reinhardtii minus Mating Type Is Controlled by Two Genes, MID and MTD1 Genetics 2007 176: 913–925. [Abstract] [Full Text] [PDF] Shin Sugiyama, Satoru Moritoh, Yoshimi Furukawa, Tomohiko Mizuno, Young-Mi Lim, Leo Tsuda, and Yasuyoshi Nishida Involvement of the Mitochondrial Protein Translocator Component Tim50 in Growth, Cell Proliferation and the Modulation of Respiration in Drosophila Genetics 2007 176: 927–936. [Abstract] [Full Text] [PDF] Wensheng Liu, Radhakrishnan Gnanasambandam, Jeffery Benjamin, Gunisha Kaur, Patricia B. Getman, Alan J. Siegel, Randall D. Shortridge, and Satpal Singh Mutations in Cytochrome c Oxidase Subunit VIa Cause Neurodegeneration and Motor Dysfunction in Drosophila Genetics 2007 176: 937–946. [Abstract] [Full Text] [PDF] Stephanie M. Rollmann, Akihiko Yamamoto, Tim Goossens, Liesbeth Zwarts, Zsuzsanna Callaerts-Végh, Patrick Callaerts, Koenraad Norga, Trudy F. C. Mackay, and Robert R. H. Anholt The Early Developmental Gene Semaphorin 5c Contributes to Olfactory Behavior in Adult Drosophila Genetics 2007 176: 947–956. [Abstract] [Full Text] [PDF]
Population and evolutionary genetics José M. Ponciano, Leen De Gelder, Eva M. Top, and Paul Joyce The Population Biology of Bacterial Plasmids: A Hidden Markov Model Approach Genetics 2007 176: 957–968. [Abstract] [Full Text] [PDF] [Data Supplement] Arkendra De and Richard Durrett Stepping-Stone Spatial Structure Causes Slow Decay of Linkage Disequilibrium and Shifts the Site Frequency Spectrum Genetics 2007 176: 969–981. [Abstract] [Full Text] [PDF] Aurora García-Dorado Shortcut Predictions for Fitness Properties at the Mutation–Selection–Drift Balance and for Its Buildup After Size Reduction Under Different Management Strategies Genetics 2007 176: 983–997. [Abstract] [Full Text] [PDF] Antoine Barrière and Marie-Anne Félix Temporal Dynamics and Linkage Disequilibrium in Natural Caenorhabditis elegans Populations Genetics 2007 176: 999–1011. [Abstract] [Full Text] [PDF] [Data Supplement] Martin T. Ferris, Paul Joyce, and Christina L. Burch High Frequency of Mutations That Expand the Host Range of an RNA Virus Genetics 2007 176: 1013–1022. [Abstract] [Full Text] [PDF] Shaojun Liu, Qinbo Qin, Jun Xiao, Wenting Lu, Jiamin Shen, Wei Li, Jifang Liu, Wei Duan, Chun Zhang, Min Tao, Rurong Zhao, Jinpeng Yan, and Yun Liu The Formation of the Polyploid Hybrids From Different Subfamily Fish Crossings and Its Evolutionary Significance Genetics 2007 176: 1023–1034. [Abstract] [Full Text] [PDF] Maciej F. Boni, David Posada, and Marcus W. Feldman An Exact Nonparametric Method for Inferring Mosaic Structure in Sequence Triplets Genetics 2007 176: 1035–1047. [Abstract] [Full Text] [PDF] [Data Supplement] Marc Vandeputte, Mathilde Dupont-Nivet, Hervé Chavanne, and Béatrice Chatain A Polygenic Hypothesis for Sex Determination in the European Sea Bass Dicentrarchus labrax Genetics 2007 176: 1049–1057. [Abstract] [Full Text] [PDF] Michael Turelli and Leonie C. Moyle Asymmetric Postmating Isolation: Darwin's Corollary to Haldane's Rule Genetics 2007 176: 1059–1088. [Abstract] [Full Text] [PDF] Sinéad Collins, Juliette de Meaux, and Claudia Acquisti Adaptive Walks Toward a Moving Optimum Genetics 2007 176: 1089–1099. [Abstract] [Full Text] [PDF] [Data Supplement] Jeremy Van Cleve and Marcus W. Feldman Sex-Specific Viability, Sex Linkage and Dominance in Genomic Imprinting Genetics 2007 176: 1101–1118. [Abstract] [Full Text] [PDF] [Data Supplement] Ben J. Evans Ancestry Influences the Fate of Duplicated Genes Millions of Years After Polyploidization of Clawed Frogs (Xenopus) Genetics 2007 176: 1119–1130. [Abstract] [Full Text] [PDF] [Data Supplement] David J. Begun, Heather A. Lindfors, Andrew D. Kern, and Corbin D. Jones Evidence for de Novo Evolution of Testis-Expressed Genes in the Drosophila yakuba/Drosophila erecta Clade Genetics 2007 176: 1131–1137. [Abstract] [Full Text] [PDF] [Data Supplement] Sha Tang and Bradley C. Hyman Mitochondrial Genome Haplotype Hypervariation Within the Isopod Parasitic Nematode Thaumamermis cosgrovei Genetics 2007 176: 1139–1150. [Abstract] [Full Text] [PDF] [Data Supplement]
Genetics of complex traits José M. Álvarez-Castro and Örjan Carlborg A Unified Model for Functional and Statistical Epistasis and Its Application in Quantitative Trait Loci Analysis Genetics 2007 176: 1151–1167. [Abstract] [Full Text] [PDF] Runqing Yang and Shizhong Xu Bayesian Shrinkage Analysis of Quantitative Trait Loci for Dynamic Traits Genetics 2007 176: 1169–1185. [Abstract] [Full Text] [PDF] Jiasheng Wu, Bo Zhang, Yuehua Cui, Wei Zhao, Li'an Xu, Minren Huang, Yanru Zeng, Jun Zhu, and Rongling Wu Genetic Mapping of Developmental Instability: Design, Model and Algorithm Genetics 2007 176: 1187–1196. [Abstract] [Full Text] [PDF] Anders Albrechtsen, Sofie Castella, Gitte Andersen, Torben Hansen, Oluf Pedersen, and Rasmus Nielsen A Bayesian Multilocus Association Method: Allowing for Higher-Order Interaction in Association Studies Genetics 2007 176: 1197–1208. [Abstract] [Full Text] [PDF] Seth C. Britch, Emma J. Swartout, Daniel D. Hampton, Michael L. Draney, Jiming Chu, Jeremy L. Marshall, and Daniel J. Howard Genetic Architecture of Conspecific Sperm Precedence in Allonemobius fasciatus and A. socius Genetics 2007 176: 1209–1222. [Abstract] [Full Text] [PDF] Ian M. Ehrenreich, Phillip A. Stafford, and Michael D. Purugganan The Genetic Architecture of Shoot Branching in Arabidopsis thaliana: A Comparative Assessment of Candidate Gene Associations vs. Quantitative Trait Locus Mapping Genetics 2007 176: 1223–1236. [Abstract] [Full Text] [PDF] [Data Supplement] Lawrence N. Kwong, Alexandra Shedlovsky, Bryan S. Biehl, Linda Clipson, Cheri A. Pasch, and William F. Dove Identification of Mom7, a Novel Modifier of ApcMin/+ on Mouse Chromosome 18 Genetics 2007 176: 1237–1244. [Abstract] [Full Text] [PDF] [Data Supplement] Anthony C. Fiumera, Bethany L. Dumont, and Andrew G. Clark Associations Between Sperm Competition and Natural Variation in Male Reproductive Genes on the Third Chromosome of Drosophila melanogaster Genetics 2007 176: 1245–1260. [Abstract] [Full Text] [PDF] [Data Supplement] Stuart J. Macdonald and Anthony D. Long Joint Estimates of Quantitative Trait Locus Effect and Frequency Using Synthetic Recombinant Populations of Drosophila melanogaster Genetics 2007 176: 1261–1281. [Abstract] [Full Text] [PDF] Anne Simonsen, Robert C. Cumming, Karine Lindmo, Vanessa Galaviz, Susan Cheng, Tor Erik Rusten, and Kim D. Finley Genetic Modifiers of the Drosophila Blue Cheese Gene Link Defects in Lysosomal Transport With Decreased Life Span and Altered Ubiquitinated-Protein Profiles Genetics 2007 176: 1283–1297. [Abstract] [Full Text] [PDF] [Data Supplement]
Genome and systems biology Naoki Osato, Yoshiyuki Suzuki, Kazuho Ikeo, and Takashi Gojobori Transcriptional Interferences in cis Natural Antisense Transcripts of Humans and Mice Genetics 2007 176: 1299–1306. [Abstract] [Full Text] [PDF] [Data Supplement] Jun Zhang, Karen L. Schulze, P. Robin Hiesinger, Kaye Suyama, Stream Wang, Matthew Fish, Melih Acar, Roger A. Hoskins, Hugo J. Bellen, and Matthew P. Scott Thirty-One Flavors of Drosophila Rab Proteins Genetics 2007 176: 1307–1322. [Abstract] [Full Text] [PDF] [Data Supplement] Jittima Piriyapongsa, Leonardo Mariño-Ramírez, and I. King Jordan Origin and Evolution of Human microRNAs From Transposable Elements Genetics 2007 176: 1323–1337. [Abstract] [Full Text] [PDF] [Data Supplement]
Genome integrity and transmission Jing Xie, Seneca L. Bessling, Timothy K. Cooper, Harry C. Dietz, Andrew S. McCallion, and Shannon Fisher Manipulating Mitotic Recombination in the Zebrafish Embryo Through RecQ Helicases Genetics 2007 176: 1339–1342. [Abstract] [Full Text] [PDF]
Gene expression Lev Usakin, José Abad, Vasily V. Vagin, Beatriz de Pablos, Alfredo Villasante, and Vladimir A. Gvozdev Transcription of the 1.688 Satellite DNA Family Is Under the Control of RNA Interference Machinery in Drosophila melanogaster Ovaries Genetics 2007 176: 1343–1349. [Abstract] [Full Text] [PDF] [Data Supplement] Hugh M. Robertson, Julia A. Navik, Kimberly K. O. Walden, and Hans-Willi Honegger The Bursicon Gene in Mosquitoes: An Unusual Example of mRNA Trans-splicing Genetics 2007 176: 1351–1353. [Abstract] [Full Text] [PDF] [Data Supplement] Xiaomin Bao, Huai Deng, Jørgen Johansen, Jack Girton, and Kristen M. Johansen Loss-of-Function Alleles of the JIL-1 Histone H3S10 Kinase Enhance Position-Effect Variegation at Pericentric Sites in Drosophila Heterochromatin Genetics 2007 176: 1355–1358. [Abstract] [Full Text] [PDF]
Developmental and behavioral genetics Robert J. Schmitz, Lewis Hong, Kathleen E. Fitzpatrick, and Richard M. Amasino DICER-LIKE 1 and DICER-LIKE 3 Redundantly Act to Promote Flowering via Repression of FLOWERING LOCUS C in Arabidopsis thaliana Genetics 2007 176: 1359–1362. [Abstract] [Full Text] [PDF]
Population and evolutionary genetics Arindam RoyChoudhury and Matthew Stephens Fast and Accurate Estimation of the Population-Scaled Mutation Rate, , From Microsatellite Genotype Data Genetics 2007 176: 1363–1366. [Abstract] [Full Text] [PDF] Ioannis Theologidis, Carlos Saavedra, and Eleftherios Zouros No Evidence for Absence of Paternal mtDNA in Male Progeny From Pair Matings of the Mussel Mytilus galloprovincialis Genetics 2007 176: 1367–1369. [Abstract] [Full Text] [PDF]
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