Genetics -- Table of Contents (166 [1])

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Norman H. Horowitz, Paul Berg, Maxine Singer, Joshua Lederberg, Millard Susman, John Doebley, and James F. Crow: A Centennial: George W. Beadle, 1903–1989
Genetics 2004 166: 1–10. [Full Text] [PDF]

GENETICS EDUCATION

Patricia J. Pukkila: Introducing Student Inquiry in Large Introductory Genetics Classes
Genetics 2004 166: 11–18. [Abstract] [Full Text] [PDF]

INVESTIGATIONS

Art Poon and Lin Chao: Drift Increases the Advantage of Sex in RNA Bacteriophage ${Phi}$ 6
Genetics 2004 166: 19–24. [Abstract] [Full Text] [PDF]

T. Daniel Andrews and Takashi Gojobori: Strong Positive Selection and Recombination Drive the Antigenic Variation of the PilE Protein of the Human Pathogen Neisseria meningitidis
Genetics 2004 166: 25–32. [Abstract] [Full Text] [PDF]

Robert V. Skibbens: Chl1p, a DNA Helicase-Like Protein in Budding Yeast, Functions in Sister-Chromatid Cohesion
Genetics 2004 166: 33–42. [Abstract] [Full Text] [PDF]

Louise J. Johnson, Vassiliki Koufopanou, Matthew R. Goddard, Richard Hetherington, Stefanie M. Schäfer, and Austin Burt: Population Genetics of the Wild Yeast Saccharomyces paradoxus
Genetics 2004 166: 43–52. [Abstract] [Full Text] [PDF]

Mark W. Murphy, Brian L. Olson, and Paul G. Siliciano: The Yeast Splicing Factor Prp40p Contains Functional Leucine-Rich Nuclear Export Signals That Are Essential for Splicing
Genetics 2004 166: 53–65. [Abstract] [Full Text] [PDF]

Bryce Nelson, Ainslie B. Parsons, Marie Evangelista, Karen Schaefer, Kathy Kennedy, Steven Ritchie, Tracey L. Petryshen, and Charles Boone: Fus1p Interacts With Components of the Hog1p Mitogen-Activated Protein Kinase and Cdc42p Morphogenesis Signaling Pathways to Control Cell Fusion During Yeast Mating
Genetics 2004 166: 67–77. [Abstract] [Full Text] [PDF]

Laurie Ann Papacs, Yu Sun, Erica L. Anderson, Jianjun Sun, and Scott G. Holmes: REP3-Mediated Silencing in Saccharomyces cerevisiae
Genetics 2004 166: 79–87. [Abstract] [Full Text] [PDF]

Alison Coluccio, Maria Malzone, and Aaron M. Neiman: Genetic Evidence of a Role for Membrane Lipid Composition in the Regulation of Soluble NEM-Sensitive Factor Receptor Function in Saccharomyces cerevisiae
Genetics 2004 166: 89–97. [Abstract] [Full Text] [PDF]

R. Linning, D. Lin, N. Lee, M. Abdennadher, D. Gaudet, P. Thomas, D. Mills, J. W. Kronstad, and G. Bakkeren: Marker-Based Cloning of the Region Containing the UhAvr1 Avirulence Gene From the Basidiomycete Barley Pathogen Ustilago hordei
Genetics 2004 166: 99–111. [Abstract] [Full Text] [PDF]

Toshiaki Ohara, Iori Inoue, Fumio Namiki, Hitoshi Kunoh, and Takashi Tsuge: REN1 Is Required for Development of Microconidia and Macroconidia, but Not of Chlamydospores, in the Plant Pathogenic Fungus Fusarium oxysporum
Genetics 2004 166: 113–124. [Abstract] [Full Text] [PDF]

Hervé Lalucque and Philippe Silar: Incomplete Penetrance and Variable Expressivity of a Growth Defect as a Consequence of Knocking Out Two K⁺ Transporters in the Euascomycete Fungus Podospora anserina
Genetics 2004 166: 125–133. [Abstract] [Full Text] [PDF]

Véronique Contamine, Denise Zickler, and Marguerite Picard: The Podospora rmp1 Gene Implicated in Nucleus-Mitochondria Cross-Talk Encodes an Essential Protein Whose Subcellular Location Is Developmentally Regulated
Genetics 2004 166: 135–150. [Abstract] [Full Text] [PDF]

Jiabin Chen, Xiajun Li, and Iva Greenwald: sel-7, a Positive Regulator of lin-12 Activity, Encodes a Novel Nuclear Protein in Caenorhabditis elegans
Genetics 2004 166: 151–160. [Abstract] [Full Text] [PDF]

James P. McKay, David M. Raizen, Alexander Gottschalk, William R. Schafer, and Leon Avery: eat-2 and eat-18 Are Required for Nicotinic Neurotransmission in the Caenorhabditis elegans Pharynx
Genetics 2004 166: 161–169. [Abstract] [Full Text] [PDF]

Kellee R. Siegfried, Ambrose R. Kidd, III, Michael A. Chesney, and Judith Kimble: The sys-1 and sys-3 Genes Cooperate With Wnt Signaling to Establish the Proximal-Distal Axis of the Caenorhabditis elegans Gonad
Genetics 2004 166: 171–186. [Abstract] [Full Text] [PDF]

Florence Janody, Jeffrey D. Lee, Neal Jahren, Dennis J. Hazelett, Aude Benlali, Grant I. Miura, Irena Draskovic, and Jessica E. Treisman: A Mosaic Genetic Screen Reveals Distinct Roles for trithorax and Polycomb Group Genes in Drosophila Eye Development
Genetics 2004 166: 187–200. [Abstract] [Full Text] [PDF]

Diego Alvarado, Amy H. Rice, and Joseph B. Duffy: Knockouts of Kekkon1 Define Sequence Elements Essential for Drosophila Epidermal Growth Factor Receptor Inhibition
Genetics 2004 166: 201–211. [Abstract] [Full Text] [PDF]

Frederick A. Derheimer, Christina M. MacLaren, Brandon P. Weasner, Diego Alvarado, and Joseph B. Duffy: Conservation of an Inhibitor of the Epidermal Growth Factor Receptor, Kekkon1, in Dipterans
Genetics 2004 166: 213–224. [Abstract] [Full Text] [PDF]

Rohit Joshi, K. Venkatesh, R. Srinivas, Shalima Nair, and Gaiti Hasan: Genetic Dissection of itpr Gene Function Reveals a Vital Requirement in Aminergic Cells of Drosophila Larvae
Genetics 2004 166: 225–236. [Abstract] [Full Text] [PDF]

John F. Baines, John Parsch, and Wolfgang Stephan: Pleiotropic Effect of Disrupting a Conserved Sequence Involved in a Long-Range Compensatory Interaction in the Drosophila Adh Gene
Genetics 2004 166: 237–242. [Abstract] [Full Text] [PDF]

Michael J. Simmons, John D. Raymond, Jarad B. Niemi, Jeremy R. Stuart, and Peter J. Merriman: The P Cytotype in Drosophila melanogaster: A Maternally Transmitted Regulatory State of the Germ Line Associated With Telomeric P Elements
Genetics 2004 166: 243–254. [Abstract] [Full Text] [PDF]

Jarad B. Niemi, John D. Raymond, Ryan Patrek, and Michael J. Simmons: Establishment and Maintenance of the P Cytotype Associated With Telomeric P Elements in Drosophila melanogaster
Genetics 2004 166: 255–264. [Abstract] [Full Text] [PDF]

Suzana Casaccia Vaz and Antonio Bernardo Carvalho: Evolution of Autosomal Suppression of the Sex-Ratio Trait in Drosophila
Genetics 2004 166: 265–277. [Abstract] [Full Text] [PDF]

Anthony J. Greenberg, Judith L. Yanowitz, and Paul Schedl: The Drosophila GAGA Factor Is Required for Dosage Compensation in Males and for the Formation of the Male-Specific-Lethal Complex Chromatin Entry Site at 12DE
Genetics 2004 166: 279–289. [Abstract] [Full Text] [PDF]

Anne Genissel, Tomi Pastinen, Andrea Dowell, Trudy F. C. Mackay, and Anthony D. Long: No Evidence for an Association Between Common Nonsynonymous Polymorphisms in Delta and Bristle Number Variation in Natural and Laboratory Populations of Drosophila melanogaster
Genetics 2004 166: 291–306. [Abstract] [Full Text] [PDF]

Paul B. Samollow, Candace M. Kammerer, Susan M. Mahaney, Jennifer L. Schneider, Scott J. Westenberger, John L. VandeBerg, and Edward S. Robinson: First-Generation Linkage Map of the Gray, Short-Tailed Opossum, Monodelphis domestica, Reveals Genome-Wide Reduction in Female Recombination Rates
Genetics 2004 166: 307–329. [Abstract] [Full Text] [PDF]

Xin Du, Koichi Tabeta, Kasper Hoebe, Haiquan Liu, Navjiwan Mann, Suzanne Mudd, Karine Crozat, Sosathya Sovath, Xiaohua Gong, and Bruce Beutler: Velvet, a Dominant Egfr Mutation That Causes Wavy Hair and Defective Eyelid Development in Mice
Genetics 2004 166: 331–340. [Abstract] [Full Text] [PDF]

Alessandra Stella and Paul J. Boettcher: Optimal Designs for Linkage Disequilibrium Mapping and Candidate Gene Association Tests in Livestock Populations
Genetics 2004 166: 341–350. [Abstract] [Full Text] [PDF]

Gabor T. Marth, Eva Czabarka, Janos Murvai, and Stephen T. Sherry: The Allele Frequency Spectrum in Genome-Wide Human Variation Data Reveals Signals of Differential Demographic History in Three Large World Populations
Genetics 2004 166: 351–372. [Abstract] [Full Text] [PDF]

Sebastián E. Ramos-Onsins, Barbara E. Stranger, Thomas Mitchell-Olds, and Montserrat Aguadé: Multilocus Analysis of Variation and Speciation in the Closely Related Species Arabidopsis halleri and A. lyrata
Genetics 2004 166: 373–388. [Abstract] [Full Text] [PDF] [Supplementary Material]

Junkang Rong, Colette Abbey, John E. Bowers, Curt L. Brubaker, Charlene Chang, Peng W. Chee, Terrye A. Delmonte, Xiaoling Ding, Juan J. Garza, Barry S. Marler, Chan-hwa Park, Gary J. Pierce, Katy M. Rainey, Vipin K. Rastogi, Stefan R. Schulze, Norma L. Trolinder, Jonathan F. Wendel, Thea A. Wilkins, T. Dawn Williams-Coplin, Rod A. Wing, Robert J. Wright, Xinping Zhao, Linghua Zhu, and Andrew H. Paterson: A 3347-Locus Genetic Recombination Map of Sequence-Tagged Sites Reveals Features of Genome Organization, Transmission and Evolution of Cotton (Gossypium)
Genetics 2004 166: 389–417. [Abstract] [Full Text] [PDF]

Hao Ma, Paul H. Moore, Zhiyong Liu, Minna S. Kim, Qingyi Yu, Maureen M. M. Fitch, Terry Sekioka, Andrew H. Paterson, and Ray Ming: High-Density Linkage Mapping Revealed Suppression of Recombination at the Sex Determination Locus in Papaya
Genetics 2004 166: 419–436. [Abstract] [Full Text] [PDF]

Stacey Melquist and Judith Bender: An Internal Rearrangement in an Arabidopsis Inverted Repeat Locus Impairs DNA Methylation Triggered by the Locus
Genetics 2004 166: 437–448. [Abstract] [Full Text] [PDF]

Fabrice Roux, Jacques Gasquez, and Xavier Reboud: The Dominance of the Herbicide Resistance Cost in Several Arabidopsis thaliana Mutant Lines
Genetics 2004 166: 449–460. [Abstract] [Full Text] [PDF]

Muharrem Dilbirligi, Mustafa Erayman, Devinder Sandhu, Deepak Sidhu, and Kulvinder S. Gill: Identification of Wheat Chromosomal Regions Containing Expressed Resistance Genes
Genetics 2004 166: 461–481. [Abstract] [Full Text] [PDF]

Peter J. van Dijk and J. M. Tanja Bakx-Schotman: Formation of Unreduced Megaspores (Diplospory) in Apomictic Dandelions (Taraxacum officinale, s.l.) Is Controlled by a Sex-Specific Dominant Locus
Genetics 2004 166: 483–492. [Abstract] [Full Text] [PDF]

A. J. Hayes, S. C. Jeong, M. A. Gore, Y. G. Yu, G. R. Buss, S. A. Tolin, and M. A. Saghai Maroof: Recombination Within a Nucleotide-Binding-Site/Leucine-Rich-Repeat Gene Cluster Produces New Variants Conditioning Resistance to Soybean Mosaic Virus in Soybeans
Genetics 2004 166: 493–503. [Abstract] [Full Text] [PDF]

Daniel J. Schaid: Linkage Disequilibrium Testing When Linkage Phase Is Unknown
Genetics 2004 166: 505–512. [Abstract] [Full Text] [PDF]

Sean H. Rice: Developmental Associations Between Traits: Covariance and Beyond
Genetics 2004 166: 513–526. [Abstract] [Full Text] [PDF]

Leopoldo Sánchez and John A. Woolliams: Impact of Nonrandom Mating on Genetic Variance and Gene Flow in Populations With Mass Selection
Genetics 2004 166: 527–535. [Abstract] [Full Text] [PDF]

Carsten Wiuf: Inference on Recombination and Block Structure Using Unphased Data
Genetics 2004 166: 537–545. [Abstract] [Full Text] [PDF]

Miguel Pérez-Enciso: In Silico Study of Transcriptome Genetic Variation in Outbred Populations
Genetics 2004 166: 547–554. [Abstract] [Full Text] [PDF]

Hongyan Xu and Yun-Xin Fu: Estimating Effective Population Size or Mutation Rate With Microsatellites
Genetics 2004 166: 555–563. [Abstract] [Full Text] [PDF]

Hamish G. Spencer, Marcus W. Feldman, Andrew G. Clark, and Anton E. Weisstein: The Effect of Genetic Conflict on Genomic Imprinting and Modification of Expression at a Sex-Linked Locus
Genetics 2004 166: 565–579. [Abstract] [Full Text] [PDF]

Rongling Wu, Chang-Xing Ma, and George Casella: A Bivalent Polyploid Model for Mapping Quantitative Trait Loci in Outcrossing Tetraploids
Genetics 2004 166: 581–595. [Abstract] [Full Text] [PDF]

Xu-Sheng Zhang, Jinliang Wang, and William G. Hill: Influence of Dominance, Leptokurtosis and Pleiotropy of Deleterious Mutations on Quantitative Genetic Variation at Mutation-Selection Balance
Genetics 2004 166: 597–610. [Abstract] [Full Text] [PDF]

R. L. Fernando, D. Nettleton, B. R. Southey, J. C. M. Dekkers, M. F. Rothschild, and M. Soller: Controlling the Proportion of False Positives in Multiple Dependent Tests
Genetics 2004 166: 611–619. [Abstract] [Full Text] [PDF]

Richard Durrett, Rasmus Nielsen, and Thomas L. York: Bayesian Estimation of Genomic Distance
Genetics 2004 166: 621–629. [Abstract] [Full Text] [PDF]

NOTE

Erik D. Andrulis, David C. Zappulla, Krassimira Alexieva-Botcheva, Carlos Evangelista, and Rolf Sternglanz: One-Hybrid Screens at the Saccharomyces cerevisiae HMR Locus Identify Novel Transcriptional Silencing Factors
Genetics 2004 166: 631–635. [Abstract] [Full Text] [PDF]

Thomas F. McCutchan, Dharmendar Rathore, and Jun Li: Compensatory Evolution in the Human Malaria Parasite Plasmodium ovale
Genetics 2004 166: 637–640. [Abstract] [Full Text] [PDF]

Jean-Luc Jannink and Rohan L. Fernando: On the Metropolis-Hastings Acceptance Probability to Add or Drop a Quantitative Trait Locus in Markov Chain Monte Carlo-Based Bayesian Analyses
Genetics 2004 166: 641–643. [Abstract] [Full Text] [PDF]