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doi:10.1534/genetics.108.090852
A more recent version of this article appeared on April 1, 2009.
Originally published as Genetics Published Articles Ahead of Print on February 23, 2009.
REGULAR RESEARCH PAPERS |
A Collection of Ds Insertional Mutants Associated With Defects in Male Gametophyte Development and Function in Arabidopsis thaliana
Leonor C. Boavida 1, Bin Shuai 1, Hee-Ju Yu 2, Gabriela Pagnussat 2, Venkatesan Sundaresan 3 and Sheila McCormick 1*
1 Plant Gene Expression Center
2 UC Davis
3 University of California
* To whom correspondence should be addressed. E-mail: sheilamc{at}nature.berkeley.edu.
Submitted on May 1, 2008
Accepted on 13 February 2009
Functional analyses of the Arabidopsis genome require analysis of the gametophytic generation, since about 10% of the genes are expressed in the male gametophyte and about 9% in the female gametophyte. Here we describe the genetic and molecular characterization of 67 Ds insertion lines that show reduced transmission through the male gametophyte. About half of these mutations are male gametophytic-specific mutations, while the others also affect female transmission. Genomic sequences flanking both sides of the Ds element were recovered for 39 lines; for 16 the Ds elements were inserted in or close to coding regions, while 7 were located in intergenic/unannotated regions of the genome. For the remaining 16 lines, chromosomal rearrangements such as translocations or deletions, ranging between 30 kb to 500 kb, were associated with the transposition event. The mutants were classified into five groups according to the developmental processes affected; these ranged from defects in early stages of gametogenesis to later defects affecting pollen germination, pollen tube growth, polarity or guidance, or pollen tube-embryo sac interactions or fertilization. The isolated mutants carry Ds insertions in genes with diverse biological functions and potentially specify new functions for several unannotated or unknown proteins.
Key Words: Ds insertion, pollen development, pollen germination, pollen tube growth, pollen-pistil interaction