Genetics. Published Articles Ahead of Print: August 24, 2007, Copyright © 2007
doi:10.1534/genetics.107.074690


A more recent version of this article appeared on November 1, 2007.


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Identification of Mutations That Decrease The Stability of a Fragment of S. cerevisiae Chromosome III Lacking Efficient Replicators

1 UMDNJ-New Jersey Medical School
2 University of Rome 'La Sapienza'
3 FIRC Institute of Molecular Oncology Foundation

* To whom correspondence should be addressed. E-mail: newlon{at}umdnj.edu.

Submitted on April 17, 2007
Revised on May 30, 2007
Accepted on 23 July 2007


Abstract

Eukaryotic chromosomes are duplicated during S phase and transmitted to progeny during mitosis with high fidelity. Chromosome duplication is controlled at the level of replication initiation, which occurs at cis-acting replicator sequences that are spaced at intervals of approximately 40 kb along the chromosomes of the budding yeast, Saccharomyces cerevisiae. Surprisingly, we found that derivatives of yeast Chromosome III that lack known replicators were replicated and segregated properly in at least 96% of cell divisions. To gain insight into the mechanisms that maintain these 'originless' chromosome fragments, we screened for mutants defective in the maintenance of an 'originless' chromosome fragment, but proficient in the maintenance of the same fragment that carries its normal complement of replicators (originless fragment maintenance mutants). We show that three of these Ofm mutations appear to disrupt different processes involved in chromosome transmission. The OFM1-1 mutant seems to disrupt an alternative initiation mechanism, and the ofm6 mutant appears to be defective in replication fork progression. ofm14 is an allele of RAD9, which is required for the activation of the DNA damage checkpoint, suggesting that this checkpoint plays a key role in the maintenance of the 'originless' fragment. Chromosome duplication is controlled at the level of replication initiation, which occurs at cis-acting replicator sequences that are spaced at intervals of approximately 40 kb along the chromosomes of the budding yeast, Saccharomyces cerevisiae. Surprisingly, we found that derivatives of yeast Chromosome III that lack known replicators were replicated and segregated properly in at least 96% of cell divisions. To gain insight into the mechanisms that maintain these 'originless' chromosome fragments, we screened for mutants defective in the maintenance of an 'originless' chromosome fragment, but proficient in the maintenance of the same fragment that carries its normal complement of replicators (originless fragment maintenance mutants). We show that three of these Ofm mutations appear to disrupt different processes involved in chromosome transmission. The OFM1-1 mutant has a slight DNA replication initiation defect, and the ofm6 mutant appears to be defective in replication fork progression. ofm14 is an allele of RAD9, which is required for the activation of the DNA damage checkpoint, suggesting that this checkpoint plays a key role in the maintenance of the 'originless' fragment.

Key Words: ARS elements, DNA replication, Originless Fragment Maintenance Mutants, RAD9, replicator deletions