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Genetics, Vol. 176, 243-253, May 2007, Copyright © 2007
doi:10.1534/genetics.106.068239
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* Department of Biological Sciences, Northern Illinois University, DeKalb, Illinois 60115 and
Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska 68588-0660
2 Corresponding author: Department of Biological Sciences, 1425 W. Lincoln Highway, Montomery Hall Bldg., Northern Illinois University, DeKalb, IL 60115.
E-mail: amcalvo{at}niu.edu
| ABSTRACT |
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The budding yeast S. cerevisiae has been a model for studies on sphingolipid biosynthesis, thereby permitting the identification of most genes required for sphingolipid synthesis in A. nidulans (summarized in Figure 1). De novo synthesis of sphingolipids in S. cerevisiae starts with the condensation of serine and palmitoyl Coenzyme A (CoA) to yield 3-ketosphinganine, which is catalyzed by a serine palmitoyltransferase (HANADA 2003). The lcbA gene is required for this step in A. nidulans (CHENG et al. 2001). 3-Ketosphinganine is then reduced to form sphingoid base dihydrosphingosine (DHS) in yeast (BEELER et al. 1998). The corresponding gene for this step has not been reported in A. nidulans. DHS is hydroxylated on the C-4 to form the sphingoid base phytosphingosine (PHS) in yeast and further converted to phytoceramide by the condensation of acyl-CoA with PHS (MERRILL 2002). Two functionally nonoverlapping ceramide synthases, BarA and LagA, are responsible for this step in A. nidulans (LI et al. 2006). Phytoceramides are further converted to inositol phosphorylceramide (IPC) by the addition of myo-inositol phosphate in yeast (MERRILL and WANG 1986). The aurA gene is required for IPC synthesis in A. nidulans (CHENG et al. 2001). A number of sphingolipid synthesis inhibitors are well characterized. Among them, myriocin and aureobasidin A (AbA), with inhibitory activity against serine palmitoyltransferase (IKUSHIRO et al. 2004) and IPC synthase (ZHONG et al. 2000), respectively, are widely used to investigate the physiological functions of sphingolipid synthesis (CHENG et al. 2001; GOPEE and SHARMA 2003; JAHNSON et al. 2004).
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TGC; W44
C) in the Sur2 homolog (47% identity over 328 amino acids) encoded by the basA gene. This mutant, basA1, displays hypersensitivity to an antibiotic [heat stable antifungal factor (HSAF)] produced by the biocontrol agent Lysobacter enzymogenesis strain C3 (LI et al. 2006). basA1 also displays other defects, including hyperbranching, cell wall thickening, and growth arrest at restrictive temperature (LI et al. 2006). In contrast, deletion of yeast SUR2 does not cause growth defects (GRILLEY et al. 1998). Cell wall thickening is a striking phenotypic caused by the basA1 mutation and other perturbations of ceramide synthesis (LI et al. 2006). Similar to our observation in A. nidulans, dramatic alterations in cell wall structure were also observed in other fungi in response to defects in sphingolipid metabolism. For example, the cell wall is drastically thicker in S. cerevisiae when the paralogous ceramide synthases Lag1 and Lac1 are simultaneously deleted (BARZ and WALTER 1999). Cell wall thickening was also observed in a Schizosaccharomyces pombe temperature-sensitive mutant defective in sphingolipid hydrolytic activity (FEOKTISTOVA et al. 2001). All these observations suggest that cell wall thickening might be a general response to the disruption of sphingolipid metabolism. However, the mechanism for cell wall thickening in these studies was not investigated.
In addition, sphingolipids and their intermediates serve as secondary messengers mediating differentiation in mammal cells (SCHWARZ et al. 1995). The role of sphingolipids or their intermediates in fungal differentiation has not been described until now. Differentiation from vegetative hyphal growth into asexual or sexual spores is essential for fungal dissemination, survivability, and pathogenecity for many filamentous fungal species (ADAMS et al. 1998; DEISING et al. 2000; D'SOUZA and HEITMAN 2001; CALVO et al. 2002). A. nidulans has been a useful model system for studies of both asexual and sexual differentiation in filamentous fungi (ADAMS et al. 1998; CALVO et al. 2002). Morphological differentiation is triggered by specific environmental factors such as light, air, and nutrients. For example, light suppresses sexual sporulation and promotes asexual sporulation (MOONEY and YAGER 1990; YAGER 1992). Responding to environmental cues, the expression of genes required for sexual or asexual development is activated through complex signal transduction networks. Several developmental genes have been identified. For example, brlA, which encodes a zinc (Zn)-finger protein that plays an essential role in the initiation of asexual sporulation (ADAMS et al. 1988; MIRABITO et al. 1989), or the regulatory gene steA, which encodes a homeodomain-C2/H2-Zn+2 finger transcription factor required for development of ascogenous tissue and cleistothecia (VALLIM et al. 2000). The delicate balance between asexual and sexual differentiation is regulated by multiple mechanisms. The veA gene is a major regulator controlling the asexual/sexual ratio (YAGER 1992; KIM et al. 2002; KATO et al. 2003). Deletion of veA completely suppresses sexual development and promotes asexual sporulation (KIM et al. 2002). In addition, lipogenic signal molecules, known as precocious sexual inducers (psi factors), also play an important role in governing asexual and sexual differentiation (CHAMPE et al. 1987; CHAMPE and EL-ZAYAT 1989; MAZUR et al. 1991). Psi factors are composed of hydroxylated oleic (18:1) and linoleic (18:2) moieties called psiß and psi
, respectively (CALVO et al. 2001). The position of the hydroxyl groups on the fatty acid backbone further defines the psi compounds as psiB (8'-hydroxy-), psiC (5',8'-dihydroxy-), and psiA with a lactone ring at the 5' position of psiC (MAZUR et al. 1991). psiB
and psiC
promote sexual development and suppress asexual development (CHAMPE and EL-ZAYAT 1989) while psiA
has the opposite effect (CHAMPE et al. 1987). PpoA, a putative fatty acid dioxygenase required for biosynthesis of psiB
, is known to be required for sexual development. On the other hand, overexpression of ppoA reduced asexual sporulation and increased sexual sporulation (TSITSIGIANNIS et al. 2004a). Psi factors communicate with transcriptional factors regulating fungal differentiation. For example, expression of brlA was elevated in the ppoA deletion mutant while ppoA expression was reduced in the brlA deletion mutant (TSITSIGIANNIS et al. 2004a). ppoA is also regulated by veA. Expression of ppoA was completely suppressed in the veA deletion mutant (TSITSIGIANNIS et al. 2004b).
In this study, we demonstrate that BasA, essential for hyphal growth in A. nidulans, is required for phytosphingosine synthesis. Our results here indicate that accumulation of DHS might be the cause of the cell wall thickening in the basA1 mutant. Furthermore, we found that BasA has a role in A. nidulans morphogenesis, regulating the transition from asexual and to sexual development via its effects on the expression of the oxilipin gene ppoA and steA.
| MATERIALS AND METHODS |
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104 conidia/ml) were incubated in YGV statically at 28° for 12 hr, allowing them to fully germinated. Coverslips attached with germlings were then transferred to YGV supplemented with chemicals and incubated at 42° for the indicated time. Germlings were fixed and stained with Calcofluor before microscopic observation (as described in HARRIS et al. 1994).
Construction of the alcA(p)::basA strain:
A 635-bp fragment starting from the predicted initiation codon of basA was amplified with the primers Kpn0640 (ACTGGTACCATGGCTACAAACACAACTTTG; KpnI site underlined) and Pac0640R (ACC TTAATTAAGCACGACACAGATACCCCAGGTGAAC; PacI site underlined). The amplified fragment was cloned into pMCB17apx (EFIMOV 2003) using the KpnI and PacI cloning sites. This construct was transformed in wild-type strain GR5. Homologous integration of this construct generates a single full-length copy of basA regulated by alcA(p), plus a truncated version (51% of the encoding region was truncated off) controlled by the native promoter. Accordingly, transformants were propagated under alcA(p)-inducing conditions (0.1 M threonine and 0.2% fructose) and then grown under repressing conditions (1% glucose) to characterize the mutant phenotypes (OAKLEY and OSMANI 1993).
Studies of sexual and asexual development:
To calculate the production of conidiospores, Hülle cells, and ascospores, a plug (12.5 mm2) of fungal growth on agar surface was harvested with a borer and homogenized in 0.2 ml distilled water. Conidiospores, Hülle cells, and ascospores were counted with a Bright-Line hemacytomer (Hausser Scientific, Horsham, PA) under a light microscope. The mean of conidiospores, Hülle cells, and ascospores per square millimeter from three replicate growth plugs was used to represent the asexual or sexual reproductive levels on each plate. Three independent experiments were conducted.
mRNA studies:
Mycelium was harvested at various developmental stages (as indicated in each case) and lyophilized. RNA was exacted using Trizol as described by the supplier (Invitrogen, San Diego). Approximately 20 µg of total RNA was used for RNA blot analysis. Probes for steA and brlA were generated according to our previous description (KATO et al. 2003). Other probe templates were made by PCR amplifying from A. nidulans genomic DNA with the following primer pairs: for fksA, 5'-AGGAATTGACCACCGACA-3' and 5'-GGAATCCAGGGTGAGCA'; for chsB, 5'-AGCGTGACGTTGATGGA-3' and 5'-ACCAGGCAACACACTGA-3'; for ppoA, 5'-CCTGGTGTTGTTGTGGAA-3' and 5'-CTGGGAGACCACTATCCA-3'; and for basA, 5'-CCTTCGCTTGTTGATGGA-3' and 5'-TGAAAGCTGCCAGAGACA-3'.
| RESULTS |
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TGC; W44C). Complementation of the basA1 mutation with the wild-type allele resulted in normal growth (Figure 2A). BLAST searches revealed that BasA is 47% identical to the yeast SUR2 dihydrosphingosine hydroxylase over 328 amino acids (LI et al. 2006).
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In yeast, sphingolipid synthesis is required for survival, but SUR2 is not essential for viability (HAAK et al. 1997). To determine whether BasA is essential for growth (as opposed to a mere requirement for growth only at high temperatures), we generated a conditional disruption mutant following the strategy detailed in Figure 3A and in LI et al. (2006) in which full-length basA was controlled by an alcohol-dependent promoter while an additional basA copy with a 49% truncated coding region was controlled by the natural promoter (Figure 3A). When grown on minimal medium with alcA(p)-inducing carbon sources such as 100 mM threonine, 1% glycerol, or 2% ethanol, these strains grew as well as wild-type controls and displayed normal hyphal morphology (Figure 3B). However, on repressing medium, the wild-type colony size was similar to that on inducing medium, whereas the alcA(p)::basA mutant strain fails to form visible colonies even at permissive temperature, as in the case of the basA1 mutant. These results, together with the fact that the basA1 growth phenotype could be remediated by complementation with the wild-type allele (Figure 2A), indicated that the colony growth defect was due to repression of basA expression. Conidiospores from the alcA(p)::basA disruption mutant inoculated on the agar surface of repressing medium exhibited excessive swelling and formed short, fat germ tubes (Figure 3B), similar to basA1 germlings grown at restrictive temperature (LI et al. 2006). These observations demonstrate that BasA is crucial for viability in A. nidulans.
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A. nidulans has five chitin synthase genes, among which chsB is essential for normal hyphal growth (BORGIA et al. 1996). Our Northern analysis showed that chsB transcript accumulation was higher at 28° than after the heat treatment (42°) in both wild type and the basA1 mutant. chsB expression was similar in the basA1 mutant and in the wild-type strain (supplemental Figure 2 at http://www.genetics.org/supplemental/). The transcription of other chitin synthesis genes, including chsA, chsC, and chsD, was also examined. However, the transcriptional levels of these genes were too low to make a comparison between wild type and mutant (data not shown). Accumulation of fksA, the only glucan synthase gene in A. nidulans, was also higher at 28° than at 42° in both wild type and the basA1 mutant (supplemental Figure 2 at http://www.genetics.org/supplemental/). Most of the mannoprotein-encoding genes remain uncharacterized in A. nidulans, with the exception of mnpA. However, the mnpA mutant did not show any phenotypic differences with respect to wild type (JEONG et al. 2003). For this reason, we did not examine the transcriptional response of these genes in the basA1 mutation background.
Normal developmental pattern requires an intact phytosphingosine synthesis:
In cultures growing in the dark, sexual sporulation is the predominant mode of reproductive development in strains with a wild-type veA+ genetic background, while conidiation dominates in strains with a veA1 mutation (encoding a truncated VeA protein missing the first 36 amino acids) (KÄFER 1965; KIM et al. 2002). Interestingly, the basA1 strain in the veA1 background displayed increased sexual reproduction in the dark. At permissive temperature, when conidia were inoculated at the center of the plates and incubated in the dark, the control strain A28 and a complemented basA1 mutant produced a high number of conidiophores on YGT media during a 7-day incubation period. In contrast, the basA1 mutant developed sexually under the same experimental conditions (Figure 5). The golden nursing tissue composed of Hülle cells surrounding the cleistothecial primordia could be seen under the microscope (Figure 5, E and H), as well as a higher ascospore production in older cultures (Figure 5J) . Similar observations were also made with the alcA(A)::basA mutant growing on alcA(p)-repressing solid medium. When mycelium grown in liquid alcA(p)-inducible medium was transferred onto repressing solid medium, the yield of conidia was 76% lower than that of the wild type. In contrast, the production of Hülle cells in the alcA(A)::basA mutant was 39-fold higher than that of the wild type (supplemental Figure 3 at http://www.genetics.org/supplemental/). This induction of sexual development observed in alcA(A)::basA resulted in high production of ascospores. Supplementation of PHS restored a wild-type sporulation pattern to the basA1 mutant in a concentration-dependent manner. As shown in Figure 6, sexual development in the basA1 mutant was suppressed and conidiation was restored around wells where 24 µg of PHS was added.
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| DISCUSSION |
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In S. cerevisiae, the BasA homolog Sur2 is essential for C4 hydroxylation on sphingoid bases, but is not required for growth (HAAK et al. 1997; GRILLEY et al. 1998). Therefore, C4 hydroxylation of sphingoid bases is not essential for growth in yeast, which can survive by utilizing dihydrosphongosine as a substrate to form dihydroceramide and sphingolipids (HAAK et al. 1997). By contrast, in the model filamentous fungus A. nidulans, we have demonstrated that the synthesis of phytosphingosine is essential for hyphal growth. Furthermore, the growth defect of the basA1 mutant is at least partially due to insufficient supply of substrate for sphingolipid synthesis. Therefore, sphingolipids that have undergone C4 hydroxylation are presumably required for essential biological functions in A. nidulans. This might reflect an inability of the fungus to use dihydrosphingosine as substrate to form ceramide and sphingolipids.
Cell wall thickening has been previously observed in three different fungal species with defects in sphingolipid metabolism (BARZ and WALTER 1999; FEOKTISTOVA et al. 2001; LI et al. 2006), suggesting a possible role for sphingolipids in cell wall construction. Here, we provide additional evidence supporting such a role by a systemic study of the cell wall response to the disruption of sphingolipid synthesis. Our results strongly suggest that the cell wall thickening caused by various perturbations of sphingolipid synthesis is due to the accumulation of sphingoid bases such as DHS or PHS. PHS in vitro is able to activate the yeast protein kinases Pkh1 and Pkh2 (FRIANT et al. 2001; LIU et al. 2005). The well-characterized downstream substrate of the Pkh kinases is the protein kinase Pkc1, which is an essential component of the cell wall integrity pathway (DE NOBEL et al. 2000; LEVIN 2005). In yeast, the expression of
20 genes involved in cell wall synthesis is upregulated by the PKC1MAP signaling pathway (JUNG and LEVIN 1999). The entire Pkc1MAP kinase signaling pathway is conserved in filamentous fungi, including A. nidulans (DE NOBEL et al. 2000). Notably, MpkA, the A. nidulans homolog of the terminal MAP kinase Mpk1, is required for cell wall integrity (BUSSINK and OSMANI 1999). This information suggests that the sphingoid-base-dependent signal transduction pathway may also be present in A. nidulans. Therefore, the increased deposition of cell wall materials in response to the disruption of sphingolipid synthesis might reflect the activation of a sphingoid-base-dependent signaling pathway. Potential targets of this pathway in A. nidulans may include the genes involved in chitin synthesis (i.e., chsB) or the glucan synthase encoded by the fksA gene. However, the expression of these genes was not elevated in the basA1 mutant. This suggests that the downstream targets of the sphingoid-base-regulated cell wall integrity pathway might vary in different fungal species or that other additional mechanism(s) might trigger cell wall thickening in the basA1 mutant. PHS is the only identified sphingolipid intermediate that is involved in cell wall synthesis. The role of DHS in cell wall synthesis or deposition was not investigated. However, we found that DHS induced cell wall thickening more quickly than PHS, suggesting that DHS is likely a more effective signaling sphingoid base compared to PHS in regulating cell wall construction in A. nidulans. The pathway involved in the activation of cell wall synthesis by DHS will be the subject of future research.
In fungi, sphingolipids and their intermediates regulate multiple physiological processes, including the responses to heat (DICKSON 1998; JENKINS 2003) and the loss of cell wall integrity (FRIANT et al. 2001), as well as hyphal polarity (CHENG et al. 2001; LI et al. 2006). Here, we present the first evidence that sphingolipids regulate the normal developmental pattern in fungal species. The consistent developmental phenotypes caused by mutations affecting the synthesis of either phytosphingosine or ceramide indicate that the normal formation of sphingolipids is required for proper fungal differentiation. Transcription of basA was highest during the initiation stage of both conidiation and sexual development, suggesting that a burst of PHS or sphingolipid synthesis may be required for the initiation of both asexual and sexual sporulation. However, mutations of basA or the ceramide synthase genes decreased asexual sporulation but enhanced initiation of sexual development, suggesting that initiation of asexual sporulation might require higher levels of sphingolipid synthesis compared to those needed for sexual sporulation.
Although the transcription of the Aspergillus developmental gene brlA was not affected in the basA1 mutant, transcription of the oxilipin gene, ppoA, and the sexual development transcription factor steA were earlier and slightly elevated compared to wild type. Overexpression of ppoA has been demonstrated to increase the ratio of sexual sporulation to asexual sporulation (TSITSIGIANNIS et al. 2004a). Therefore the enhancement in sexual development and reduction of asexual development observed in the basA1 mutant might be a consequence of the increase in ppoA transcript levels that would lead to activation of sexual developmental genes such as steA and the consequent increase in sexual development. Considering that sphingolipids and psi factor synthesis share the same upstream precursor substrate, acetyl-CoA, and share an overlapping pathway corresponding to fatty acid synthesis, communication or interaction might exist between these two biosynthetic pathways. In this case, it is also possible that PHS or other sphingolipid intermediates might affect ppoA transcription indirectly through interactions between the sphingolipid and the psi factor biosynthetic pathways.
In conclusion, in this study we have demonstrated the role of BasA in hyphal growth and showed that sphingolipid synthesis is required for normal cell wall organization. Furthermore, our study revealed for the first time in fungi that sphingolipid synthesis also regulates the complex balance between sexual and asexual morphological differentiation in the model filamentous fungus A. nidulans.
| ACKNOWLEDGEMENTS |
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| FOOTNOTES |
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