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Bipartite Inhibition of Drosophila Epidermal Growth Factor Receptor by the Extracellular and Transmembrane Domains of Kekkon1
Diego Alvarado1,a, Amy H. Rice1,a, and Joseph B. Duffyaa Department of Biology, Indiana University, Bloomington, Indiana 47405
Corresponding author: Joseph B. Duffy, Indiana University, 1001 E. 3rd St., Bloomington, IN 47405., jduffy{at}bio.indiana.edu (E-mail)
Communicating editor: T. SCHÜPBACH
| ABSTRACT |
|---|
In Drosophila, signaling by the epidermal growth factor receptor (EGFR) is required for a diverse array of developmental decisions. Essential to these decisions is the precise regulation of the receptor's activity by both stimulatory and inhibitory molecules. To better understand the regulation of EGFR activity we investigated inhibition of EGFR by the transmembrane protein Kekkon1 (Kek1). Kek1 encodes a molecule containing leucine-rich repeats (LRR) and an immunoglobulin (Ig) domain and is the founding member of the Drosophila Kekkon family. Here we demonstrate with a series of Kek1-Kek2 chimeras that while the LRRs suffice for EGFR binding, inhibition in vivo requires the Kek1 juxta/transmembrane region. We demonstrate directly, and using a series of Kek1-EGFR chimeras, that Kek1 is not a phosphorylation substrate for the receptor in vivo. In addition, we show that EGFR inhibition is unique to Kek1 among Kek family members and that this function is not ligand or tissue specific. Finally, we have identified a unique class of EGFR alleles that specifically disrupt Kek1 binding and inhibition, but preserve receptor activation. Interestingly, these alleles map to domain V of the Drosophila EGFR, a region absent from the vertebrate receptors. Together, our results support a model in which the LRRs of Kek1 in conjunction with its juxta/transmembrane region direct association and inhibition of the Drosophila EGFR through interactions with receptor domain V.
CELLULAR communication by the epidermal growth factor receptor (EGFR) pathway is widely utilized throughout development to specify cellular fates and behaviors (![]()
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The long-standing model for activation of EGFR signaling involves receptor homo- or heterodimerization upon ligand binding (![]()
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Although the relevance of positive effectors of EGFR signaling has long been appreciated, only in the past few years has the importance of inhibitory molecules in regulating signaling strength and duration come to the forefront (![]()
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The specification of dorsal-ventral (DV) polarity in Drosophila provides one well-characterized example of the interplay between positive and negative effectors of EGFR signaling. During the latter stages of oogenesis, receptor activity is modulated by positive and negative feedback loops to pattern the DV axis (![]()
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Despite recent progress in elucidating the mechanism of Kek1 function, a number of questions remain unanswered. Currently, it is unclear what elements of Kek1 suffice for inhibition, whether other Kek molecules function redundantly with Kek1, and if Kek1 is a substrate for EGFR-mediated phosphorylation. Here we present evidence addressing these questions. Importantly, we show that while the Kek1 LRRs promote binding, the juxta/transmembrane region of Kek1 actively contributes to receptor inhibition. We demonstrate that EGFR inhibition is unique to Kek1 among the Kek family members, that Kek1 is not a substrate for EGFR phosphorylation, and confirm that Kek1 inhibits EGFR in multiple developmental contexts. Finally, we have isolated a unique class of EGFR alleles that specifically disrupt its association with Kek1.
| MATERIALS AND METHODS |
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Drosophila genetics:
Flies were raised at 27° on standard media. The following stocks were used: follicle cell drivers P{GawB}CY2 (![]()
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TC}, grkHK36 (![]()
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2-3) at a 4:1 ratio into w1118 embryos.
All pUAST constructs were misexpressed in follicle cells using CY2-GAL4 or T155-GAL4 and in the developing eye with GMR-GAL4. For chorion preparations, eggs were collected, washed, and cleared in lacto-Hoyer's solution for 48 hr at 60°. Images were captured under darkfield on a Zeiss Axiophot microscope. Ovaries from females expressing green fluorescent protein (GFP) constructs used in egglays were dissected in PBS and fixed for 10 min in 3.7% formaldehyde/PBS, washed three times in PBT (0.1% Tween-20), and brought to volume in 70% glycerol/PBS with SlowFade (Molecular Probes, Eugene, OR). GFP fluorescence images were captured with a Leica TCS SP confocal microscope. Wings were dehydrated in 100% ethanol and mounted in polyvinyl lactophenol. Scanning electron microscopy was performed as in ![]()
To identify suppressors of Kek1 misexpression in the eye, P{GAL4-ninaE.GMR}, P{UAS-kek1}/CyO recombinants were generated by standard methods from stocks containing individual P elements. w;iso2;iso3 males were mutagenized with 25 mM EMS according to previously described methods (![]()
Molecular cloning and sequence analysis:
keg-based chimeras were subcloned into pUAST in three steps. The kek1 extracellular and transmembrane region was amplified by PCR and subcloned into pUAST using 5' EcoRI and 3' BglII sites (pUAST-k1et). The gfp gene was excised from the pEGFP-N1 vector (CLONTECH, Palo Alto, CA), using 5' KpnI and 3' XbaI restriction sites, and fused in frame to pUAST-k1et (pUAST-k1et-gfp). Next, variants of the cytoplasmic domain of egfr were flanked with 5' BglII and 3' KpnI sites by PCR and incorporated into pUAST-k1et-gfp. Fragments encode the full-length cytoplasmic domain (keg), the kinase region (ke
Cg), and the C-tail (ke
Kg). Point mutations encoding kinase-dead chimeras were generated by PCR-based site-directed mutagenesis utilizing mismatch primers encoding G901R (ke*gg) and K923M (ke*kg) changes in the kinase region. pUAST-mCD8E
C-gfp was constructed by substituting the kek1 region in pUAST-ke
Cg with a PCR-based fragment from pUAST-mCD8-gfp (courtesy of Liqun Luo; ![]()
pUAST-kek1-gfp was made by first subcloning a PCR-based fragment flanked by 5' SpeI and 3' KpnI sites encoding the transmembrane-intracellular regions of kek1 into pUAST-gfp (pUAST-kek1tm-intra-gfp). Next, the extracellular domain of kek1 was amplified by PCR from its cDNA (NB1) and cloned into pUAST-kek1tm-intra-gfp using 5' EcoRI and 3' SpeI sites. pUAST-Kek2-gfp was made by amplifying the full-length gene from the NB7 cDNA and subcloning into a basal pUAST-gfp using 5' EcoRI and 3' KpnI sites. Additional details and maps are available upon request.
Kek1-Kek2 swaps were generated in vitro by overlapping PCR. Purified fragments were cloned into a Gateway-compatible pUAST-GFP destination vector, according to manufacturer's instructions (Invitrogen, Carlsbad, CA).
egfrSOK14 were sequenced from genomic DNA isolated from 810 hemizygous adult flies [SOK/Df(2R)Pu-D17] with QIAGEN DNeasy columns according to manufacturer's instructions (QIAGEN, Beverly, MA). For egfrSOK5, DNA was isolated from 3050 homozygous embryos selected from egfrSOK5/CyO, P{Act-GFP} stock. Likewise, genomic DNA was also isolated from w;iso2;iso3 adults. egfr exons were amplified individually by PCR, using primers specific to noncoding sequence flanking each exon, purified using a gel purification kit (QIAGEN), and sequenced using cycle sequencing according to the manufacturer's instructions (Applied Biosystems, Foster City, CA). Primer sequences are available upon request. Sequence alignments were performed with MAP (http://searchlauncher.bcm.tmc.edu/multi-align/multi-align.html), using the extracellular and transmembrane portion of the receptor for each of the indicated species. The start codon corresponds to the first residue with respect to numbering for the alignments.
pUAST-egfrSOK constructs were generated using PCR-based site-directed mutagenesis with mismatch primers encoding changes R738Q (egfrSOK13) and E718K (egfrSOK4). PCR fragments encoding point mutations and flanked by 5' FseI and 3' PshAI restriction sites were cloned into the corresponding region of the template pUAST-egfr1 (courtesy of Nick Baker). All pUAST-egfrSOK subclones were sequenced to confirm presence of the point mutations. Primer sequences and construct maps are available upon request.
Cell culture and immunoprecipitations:
Drosophila S3 cells were grown and maintained as described in ![]()
5 x 106 cells/ml and transfected by electroporation. Cells were cotransfected with 5 µg of metallothionein-GAL4 (mt-GAL4; ![]()
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Phosphorylation assays:
Ten ovaries per genotype were dissected in PBS and homogenized in 500 µl of RIPA buffer with protease and phosphatase inhibitors (150 mM NaCl, 100 mM Tris pH 7.4, 1% NP-40, 0.5% sodium deoxycholate, 0.1% SDS, 1 mM PMSF, 1 µM leupeptin, 1 µM pepstatin A, 0.3 µM aprotinin, 5 mg/ml ß-glycerolphosphate, 1 mM sodium orthovanadate). Ovaries were homogenized and cleared by centrifugation for 10 min. Supernatant was brought up to 1 ml and immunoprecipitations and Western blots were performed as described above. Anti-phosphotyrosine (pY99; Santa Cruz Biotechnologies, Santa Cruz, CA) was used at 1:1000 in 4% BSA. Rabbit anti-EGFR and mouse anti-
tubulin (Accurate Chemical, Westbury, NY) antibodies were used at 1:5000.
| RESULTS |
|---|
Within the Kek family, EGFR inhibition is unique to Kek1:
In its extracellular region Kek1 is composed of an N-terminal insert, a set of seven LRRs flanked by cysteine-rich caps, and a single Ig domain, which together with the transmembrane domain suffice to inhibit EGFR signaling. Within the Drosophila proteome, significant sequence similarity and a similar arrangement of motifs are found in five additional transmembrane proteins that together with Kek1 constitute the Kekkon (Kek) family (![]()
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Consistent with the ability of Kek1 to physically associate with the receptor, its misexpression during oogenesis with CY2-GAL4 results in inhibition of EGFR signaling and ventralization phenotypes similar to those observed with loss-of-function alleles of the receptor. To determine if other Kek family members displayed inhibitory effects similar to Kek1 in vivo, we generated UAS lines for Kek2, Kek4, Kek5, and Kek6 and misexpressed them during oogenesis using CY2-GAL4. Misexpression of these Keks in follicle cells has no effect on DV patterning, indicating Kek2, Kek4, Kek5, and Kek6 are not functionally analogous to Kek1 with respect to EGFR inhibition (Fig 1C). Thus, the ability to associate with and inhibit the EGFR is not a common feature shared by Kek family members and is unlikely to provide an explanation for subtlety of the kek1 null phenotype.
Kek1 attenuates receptor signaling in multiple tissues:
Initially, the subtlety of the loss-of-function phenotype for kek1 hindered identification of its role in EGFR signaling. Subsequently, however, a role for kek1 in attenuating EGFR signaling during oogenesis was uncovered in DV patterning, as determined by misexpression analysis and confirmed through loss-of-function studies (![]()
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Kek1 acts in association with EGFR in vivo and not as a ligand sink:
To address the potential for Kek1 to function as a competitive inhibitor of EGFR through ligand binding in Drosophila, we took advantage of the knowledge that chimeric proteins have been widely used in Drosophila to study the function of transmembrane receptors (![]()
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CG (Fig 3A).
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If Kek1 functions as a competitive inhibitor through homodimerization and ligand binding, the KE
CG chimera would still function as an inhibitor, since it could bind ligand but would fail to activate EGFR signaling due to the absence of the C-tail. Alternatively, if Kek1 and EGFR function as a heterodimer in vivo, KE
CG would bind and cross-phosphorylate the endogenous receptor (Fig 3B). In this scenario, misexpression of KE
CG would result in EGFR activation, rather than inhibition, confirming the presence of a Kek1/EGFR complex in vivo and providing evidence against the ligand sink model. Misexpression of KE
CG in follicle cells resulted in dorsalized chorions, an EGFR gain-of-function phenotype, strongly suggesting that it is able to activate signaling via a direct interaction with the receptor (Fig 3C). Consistent with this, KE
CG associates strongly with EGFR1 by co-immunoprecipitation (Fig 3D). Similar stimulatory effects were also observed in the wing and eye (data not shown). If this chimera requires endogenous EGFR for its activity, then reducing access to EGFR should result in suppression of its activity. Consistent with this, hemizygosity for egfr, heterozygosity with receptor alleles lacking the C-tail, or misexpression of a dominant-negative allele of egfr (DNegfr) resulted in partial or complete suppression of the KE
CG phenotype, respectively, indicating that KE
CG requires endogenous EGFR to activate signaling (Table 1). In contrast, reduced activity of the EGFR ligand Gurken (Grk) did not suppress the KE
CG phenotype, indicating that association of KE
CG with EGFR is ligand independent (Table 1). To demonstrate that the interaction between KE
CG and EGFR is not directed by the presence of the kinase domain in the chimera, a control chimera encoding the murine Ig-containing transmembrane molecule CD8 was similarly tagged with the EGFR intracellular domain lacking its C-tail and GFP (mCD8E
CGFP; Fig 3A). Misexpression of either this molecule or a form of EGFR lacking the extracellular domain (
TOP; ![]()
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Kek1 forms an inhibitory complex with EGFR:
The physical association of Kek1 with the receptor noted in vivo is consistent with a model for inhibition in which receptor dimerization and autophosphorylation are precluded by association with Kek1 (![]()
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First, we assayed for tyrosine phosphorylation of Kek1 under conditions in which its misexpression results in strong inhibition of EGFR signaling. In ovaries from CY2-GAL4, UAS-Kek1-GFP females, no detectable tyrosine phosphorylation of Kek1 is evident, supporting the latter model (Fig 4). To provide additional support for this, we tested a series of chimeric Kek1/EGFR molecules designed to functionally assay the activity of the receptor when complexed with Kek1. If Kek1 is phosphorylated by EGFR and acts as a dead end substrate, then exchanging the cytoplasmic domain of Kek1 with a phosphorylation and signaling-competent substrate (EGFR cytoplasmic domain) would enable recruitment of the appropriate adaptor proteins, thereby converting Kek1 to an activator (Fig 5A and Fig B). In contrast, if Kek1 is not a substrate for phosphorylation, no trans-phosphorylation of this Kek1/EGFR chimera would occur, thereby maintaining Kek1's function as an inhibitor (Fig 5B). These chimeras contain the extracellular and transmembrane domains of Kek1 fused to kinase-deficient forms of the intracellular domain of EGFR tagged with GFP (KEG; Fig 5A). Three distinct kinase-deficient forms of KEG (KEgG, KEkG, and KE
KG; ![]()
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KG contains an internal deletion encompassing the entire kinase domain (![]()
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As with Kek1, all three chimeras associate with the receptor by co-IPs, but are not phosphorylation substrates in vivo (Fig 4 and Fig 5A and Fig C; data not shown). Demonstrating that these chimeras are functional inhibitors, their misexpression in follicle cells resulted in strongly ventralized chorions, a phenotype comparable to that observed with Kek1 misexpression (Fig 5D). Similar inhibitory effects were also observed in other tissues (data not shown). Similar results were obtained with a form of KEgG that lacks the GFP tag (KEg), indicating that GFP does not interfere with the function or structure of the chimeras (Fig 5D). As an additional control, we confirmed that the cytoplasmic domain of EGFR is able to act as a functional phosphorylation substrate in a chimeric situation. We took advantage of the fact that Kek1 is able to homodimerize and created a control chimera, KEG, with a functional EGFR kinase domain. KEG is heavily phosphorylated in vivo and its misexpression results in dorsalization of the chorion in the presence or absence of receptor activity, consistent with the formation of homodimers and EGFR-independent activation of signaling (Fig 4 and Fig 5A, Fig C, and Fig D). This demonstrates that the cytoplasmic domain of EGFR in a Kek1 chimera is able to act as a functional signaling substrate in vivo and that the kinase activity of the inhibitory chimeras was effectively abolished by the kinase domain point mutations. Together our results argue that Kek1, as well as the chimeras, is not a phosphorylation substrate for EGFR. This supports the latter model in which the receptor kinase domain is unable to access Kek1 for phosphorylation and argues against a model in which Kek1 acts as a pseudo-substrate.
The juxta/transmembrane portion of Kek1 is essential for inhibition:
One potential explanation for the inability of the receptor to phosphorylate Kek1 is that rotation through the receptor's transmembrane region is required to appropriately position the kinase domain relative to its substrate. In this scenario, the structure of the Kek1 juxta/transmembrane (jt/tm) region might act to sterically hinder rotation. Consistent with an active role for the Kek1 jt/tm region, analysis of a series of domain swaps between Kek1 and Kek2 indicates that while the LRRs suffice for binding, the jt/tm region of Kek1 is necessary for full inhibitory activity in vivo (Fig 6). Three swaps, each containing progressively less of the extracellular/transmembrane portion of Kek1 fused to Kek2, were constructed and assayed for binding and inhibition of EGFR activity in vivo (Fig 6). All three swaps bind to the receptor, but display different degrees of inhibitory activity when assayed in vivo (Fig 6B and Fig C). The LRR (L), Ig (I), and jt/tm (T) swap (LIT), which includes the entire extracellular and transmembrane portion of Kek1 in place of the corresponding portion of Kek2, displays inhibition equivalent to full-length Kek1 (refer to Fig 1 and Fig 6C). In contrast, the next two swaps, which include only the LRRs and Ig (LI) or the LRRs (L) of Kek1, respectively, but lack the jt/tm portion of Kek1, have minimal inhibitory activity in the ovary, eye, and embryo (Fig 6C). Thus, while the LRRs of Kek1 suffice for receptor binding, the jt/tm region of Kek1 is specifically required, in addition to the LRRs, for full inhibition of the receptor in vivo. Supporting this, secreted forms of Kek1 (sKek1, sKek1GFP), display no inhibitory activity when assayed with CY2-GAL4 (data not shown; ![]()
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Novel alleles of EGFR disrupt binding and inhibition by Kek1:
One simple interpretation of the current data is that the LRRs direct association with the receptor, while the jt/tm region of Kek1 facilitates inhibition. In light of this possibility and the knowledge that Kek1 and EGFR interact directly, we reasoned that identification of suppressors of Kek1 misexpression phenotypes would likely identify mutations in EGFR that disrupt this association, providing further insight to the mechanism underlying their association. To identify such suppressors, an F1 mutagenesis screen was employed to detect dominant mutations that suppress the effects of Kek1 misexpression in the eye (![]()
CG (Fig 8 and data not shown). The SOKs do not interact indiscriminately with other molecules, but rather act in a dominant fashion to suppress Kek1-mediated increases or decreases in EGFR signaling.
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The first hint that the SOKs were not standard loss-of-function (LOF) mutations was their ability to suppress increases and decreases in EGFR signaling. Further supporting the notion that the SOKs represent unique mutations, the SOKs all map to the same region and deficiencies for this region fail to suppress the GMR-kek1 eye phenotype. Since the SOKs mapped to the vicinity of the receptor, we hypothesized that they represent unique alleles of the receptor, defective primarily in their ability to associate with Kek1. By eliminating the receptor's ability to associate with Kek1, these alleles would effectively prevent Kek1 or the Kek1/EGFR chimeras from affecting receptor signaling. Confirming this, SOK5, the only homozygous lethal SOK mutation, fails to complement alleles of egfr and contains a single missense mutation altering codon 750 (TAC to TGC), converting tyrosine to a cysteine (Y750C; Fig 9A). Thus, SOK5 represents a novel allele of the receptor that acts in a dominant fashion to suppress Kek1-dependent effects on EGFR signaling. Likewise, molecular analysis indicated that the remaining four SOKs, SOK1, SOK2, SOK3 and SOK4, also contain missense mutations in the receptor. SOK4 alters codon 718 (GAG to AAG), converting glutamic acid to a lysine (E718K), while SOK1, SOK2, and SOK3 alter codon 738 (CGA to CAA), converting arginine to a glutamine (R738Q; Fig 9A). Together the five SOKs represent changes to three residues spanning only 32 amino acids in the extracellular portion of the receptor. Moreover, they all lie within domain V, a region absent from all vertebrate orthologs of the receptor (Fig 9C). Finally, all of the SOKs are able to promote eye development (in the presence of Kek1 misexpression) and therefore must retain the ability to dimerize and initiate downstream signaling events. Consistent with this, the egfrSOK14 alleles are viable mutations and hence do not affect any vital functions of the receptor. In contrast, the lethality of egfrSOK5 indicates that it disrupts functions of the receptor essential for viability, in addition to its effects on Kek1.
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On the basis of our model, we predict that the SOK alleles retain the receptor's ability to homodimerize, while concomitantly disrupting its ability to associate with Kek1. To test this directly, we assayed the ability of the EGFRSOK molecules to associate with full-length Kek1, the activating chimera KE
CG, or wild-type EGFR in co-immunoprecipitations. Supporting our model, EGFRSOK has reduced affinity for both full-length Kek1 and KE
CG, but is able to associate efficiently with the wild-type receptor (Fig 9B). Consequently, domain V is crucial in mediating the receptor's interaction with and subsequent inhibition by Kek1.
| DISCUSSION |
|---|
Throughout development, EGFR activity specifies distinct cellular responses. Essential to this ability is the existence of an integrated network of regulatory molecules that direct receptor activity. Kek1, a member of a family of LRR- and Ig-containing molecules, represents a component of this network through its role as a feedback inhibitor of receptor activity. Deletion and mutagenesis studies have now demonstrated that the LRRs of Kek1, specifically LRR2 and G160, are essential for its association with, and consequently inhibition of, the receptor (![]()
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Bipartite inhibitionthe LRRs and jt/tm of Kek1 are required for EGFR inhibition:
While it is clear that the Kek1 LRRs are essential for EGFR binding and inhibition, secreted forms of Kek1 are nonfunctional, indicating that membrane anchoring is likely to be an essential element to the inhibitory mechanism (![]()
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CG, respectively. Moreover, two of the changes, R738Q and E718K, represent viable alleles of the receptor, capable of ligand binding and receptor activation. Together with our binding data, these results assign a role for domain V in mediating regulation by Kek1. It is interesting to note that EGFR domain V represents a third cysteine-rich domain in Drosophila, which is absent in the vertebrate ErbBs. This raises intriguing structural and evolutionary questions, as Kek1 has been reported to associate with all human ErbBs (![]()
We also provide both direct (absence of phosphorylation) and indirect evidence (chimeras) that Kek1 is not a phosphorylation substrate for the receptor. This was somewhat surprising, as structural work with the vertebrate receptor has indicated that the EGFR kinase domain is in a catalytically open configuration (![]()
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Inhibition of EGFR is not a common Kek family function:
Considering that kek1 knockouts exhibit subtle and dose-dependent phenotypes, one important question remaining is, what is the role of Kek1 in a cellular and developmental context? An initial explanation for the subtle LOF phenotype of kek1 with respect to EGFR inhibition was the possibility of functional redundancy between members of the Kek family. However, our data for Kek2, Kek4, Kek5, and Kek6 indicate that EGFR inhibition is not a common feature of the Kek family. Alternatively, Kek1's inhibitory activity might reflect a recently acquired trait and not an ancestral or conserved role. However, analysis of kek1 orthologs in Drosophila virilis, D. pseudoobscura, and Anopheles gambiae argues against such a notion (![]()
Although it is not a common feature within the Drosophila Kek family, it is unclear whether inhibition of EGFR by Kek1 represents a more widely conserved regulatory mechanism for receptors. For instance, the LRR-containing transmembrane protein Decorin binds to the human EGFR and has been implicated in the regulation of receptor activity (![]()
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Finally, a role for Kek1 in the nervous system has also been reported (![]()
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| FOOTNOTES |
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1 These authors contributed equally to this work. ![]()
| ACKNOWLEDGMENTS |
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We thank the Bloomington Drosophila Stock Center, N. Baker, L. Luo, A. Michaelson, N. Perrimon, and T. Schüpbach for reagents; T. Kaufman for advice and equipment; K. Klueg and L. Cherbas for advice in cell culture experiments; F. Rudi Turner for assistance with the SEMs; Tim Evans, Brandon Weasner, and Christopher Skipwith for their contributions to this work; and C. Ghiglione and K. Carraway III for sharing results prior to publication. We gratefully acknowledge the help of W. Forrester, A. Prieto, J. Kumar, and K. Cook in critical readings of the manuscript. This work was supported by a National Institutes of Health genetics training grant fellowship (GM07757) to D.A. and A.H.R. and by a National Science Foundation grant (IBN-0131707) to J.B.D.
Manuscript received October 1, 2003; Accepted for publication January 14, 2004.
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